Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3577g00030 ATGGCGTCTTTTTACTCCAATCCTGGACTCCATCGCCGTCCCATCTCCGATCGAGTTTACCGATCACTCCGTCAAGACCTCCACCTCCTCCACCGCTTTTACTCCACCTTCTTCGTCATCGGCGCCACCGGAAACGTCTACACAGTCACCCTCTCAACTTTCCCCTCCTGTTCATGTCCTGACCCTGTAACTCCTTGCAAGCACATTCTCTTCGTCCTCATTCGAGTCCTCGGCGTCTCTCCGGACGACGTCTTCCTCTTCCAAAGCAGTGAAAACACTCTCTTTCCCTCCGAGCTCCGCCGGATTCTGGACCAGCCGACACCGCCGGACGCCCTCGCAGACGCCGCACTCCGCCAGAGGTTTTACCAGTTGTTCTTTAACCAGAAGCAGGAACATTCCGATTGTAATACGGAGGTTGAAGATGGGACTTCATGTCCGATTTGTCTTGATGAGATGAAGAAGGAAGACAAGATTGTGGCTTGTGGGACTTGCCGGAATCCGATTCATGAACAGTGCTTTGTGAGGTGGAAGGGACGTAATGTAAATGGAATGGTTAGTTGTGTGATTTGTAGAGCTCCATGGAAGAAGGAGAATGAAGATTATGATCAGCATATGTATCTGAATCTGTCTGCTTATACTAGTCAGCCAAATGATCAAGACTGA 663 0.5023 MASFYSNPGLHRRPISDRVYRSLRQDLHLLHRFYSTFFVIGATGNVYTVTLSTFPSCSCPDPVTPCKHILFVLIRVLGVSPDDVFLFQSSENTLFPSELRRILDQPTPPDALADAALRQRFYQLFFNQKQEHSDCNTEVEDGTSCPICLDEMKKEDKIVACGTCRNPIHEQCFVRWKGRNVNGMVSCVICRAPWKKENEDYDQHMYLNLSAYTSQPNDQD 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3577g00030 220 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 14 200 IPR039903 GO:0061630
Pral3577g00030 220 ProSiteProfiles Zinc finger SWIM-type profile. 47 77 IPR007527 GO:0008270
Pral3577g00030 220 ProSiteProfiles Zinc finger RING-type profile. 145 191 IPR001841 -
Pral3577g00030 220 SUPERFAMILY RING/U-box 127 197 - -
Pral3577g00030 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 208 IPR013083 -
Pral3577g00030 220 Pfam SWIM zinc finger 47 75 IPR007527 GO:0008270
Pral3577g00030 220 Pfam Ring finger domain 144 191 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3577g00030 Pral-Chr3577 654371 655454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3577g00030 52 176 C3H Transcription Factor Family AT2G35420 29.771 1.94e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3577g00030 - - pcin:129294411 258.84