Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3577g00027 ATGGCAACATGTTGTCCAAGTTGCTCCAAGTTCACACCAAGTTCTTTTCTTCCACACTCTTCTCTCTTCAGTGTTCCTTCTAGTTCTGTGAGGCCTGTTAGTCTCCATTGTTTCTATAATTGTCAAAGACTTTGGCTTCGATCAAGCCGTCGTTGTGGTCCTCTACTAGCTACGTCGTGCAGTAATTTTGAGTCTGGAGAACTGCCAGAAGCTCAGAATGCTCTTTCAAAACTTCTTCAAGAATTCGGAGTTTCTGAGGAGGACTCTAATTCTATTGCGTCTGATTCACCAAAGTATTTGAGGATGTTGGTTGATGAAGTTCGGGAAAGGGACGAACTTTCAATGTGGGAGAAGCAAACTGATGGGTTCCAGGATAAAGTGGTTCACATTGCCAGGGAGAAAGGTGATAATGGCAAAGTTGCATACTTGGAGAGTCTCGGTTTGAGCCTCTCTTCAGCTATGAATGTGGCCAGATATCTTTCTGCAGAAACACTTACAACACTCATTCTTAAGGTCAAGTGTATGAAGGAACTGTTCTTTTCTGGCAGTGAAAGTTATGAATTCCCGGTCAGAAGAGTTCGCAATATGATGATGCAGATATCAATTCCTATTGATGAAGATCTGCAGCAGACTTTGTCCTTTTTTGAGAAGGTTGAAGCAAGGCGAGGAGGTTTAAATATGTTAAATTCCAGCGATGCTGCTTTTGATTTTTTAATTGAATCATTTCCCCGTCTACTTTTGTTATCTGTAAAATTTCACATGAAACCATTAGCGGAGTTTCTTGAGAGTGTTGGAATCCAAAGAGGTCTCATCAGAAATATACTGTTGACTTTTCCTCCCTCTTTGCTATGGAACATTGAAGTATTTAAAACTCGAGTACTAGCCTTGAAAGAGATTGGTGGTGTAAGCGACAATTATGCTAAGTTGCTGTTAAAATATCCATGGATACCATCTAAAAGCATTCAAGACAATTATCAAGAGGTTGTCTCTTTGTTTGATTCAGAGAAGGTTCCCAGGGCATTTGTGGGTCGTGCAATCAAAAGCTGGCCCCATATATTGGGCTGTTCACCTAGCAAGCTAAAACAGATGGTTGATCAGTTTCGTGAACTAGGAGTTCAACACAAGAAGTTGGGTAAAGTCATTGCTAAAAGTCCTCAGCTACTGCTACAGAAGCCGCAAGACTTTCTCGAGGTTGTTCTGTTCTTTGAAAACATGGGGTTTGATAGACAAACAATCGGGACAATATTGGCTCGCTGTCCTGAAATCTTTGCTGCCTGCCCTATCAAAACTCTCAAGAGAAAGGTTGAGTTCCTACATCGTATTGGTGTTTCTGAAGCTCACCTTCCACGGGTTATAAAAAAGTATCCAGAACTTCTTGTGTCTGACCCCGACAGAACTATGCTACCTAGGTTGATGTACTTGATGAAATTAGGACTATCTGAAAGAGACGTGGCATTCATGGTACGATCATTTTCTCCTCTGCTTGGATACAGCATTGAAGAGGTTTTGAGACCCAAAGTAGAATTCCTGGTGAACGCCATGGAGAGGCCAGTGAGGGACGTGGTGGGGTACCCCAGGTACTTTAGCTATTCTCTAGAGAAGAAGATAAAACCAAGATATTGGGTGCTTAAAGGAAGGGATATTGAGTGTAGTTTGAAGGATATGCTCTCAAAAAATGACGAAGAATTTGCTGCTGAATATATGAATCTTCCATTAACTCATTCCTGA 1728 0.4144 MATCCPSCSKFTPSSFLPHSSLFSVPSSSVRPVSLHCFYNCQRLWLRSSRRCGPLLATSCSNFESGELPEAQNALSKLLQEFGVSEEDSNSIASDSPKYLRMLVDEVRERDELSMWEKQTDGFQDKVVHIAREKGDNGKVAYLESLGLSLSSAMNVARYLSAETLTTLILKVKCMKELFFSGSESYEFPVRRVRNMMMQISIPIDEDLQQTLSFFEKVEARRGGLNMLNSSDAAFDFLIESFPRLLLLSVKFHMKPLAEFLESVGIQRGLIRNILLTFPPSLLWNIEVFKTRVLALKEIGGVSDNYAKLLLKYPWIPSKSIQDNYQEVVSLFDSEKVPRAFVGRAIKSWPHILGCSPSKLKQMVDQFRELGVQHKKLGKVIAKSPQLLLQKPQDFLEVVLFFENMGFDRQTIGTILARCPEIFAACPIKTLKRKVEFLHRIGVSEAHLPRVIKKYPELLVSDPDRTMLPRLMYLMKLGLSERDVAFMVRSFSPLLGYSIEEVLRPKVEFLVNAMERPVRDVVGYPRYFSYSLEKKIKPRYWVLKGRDIECSLKDMLSKNDEEFAAEYMNLPLTHS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3577g00027 575 Pfam mTERF 259 564 IPR003690 GO:0003690|GO:0006355
Pral3577g00027 575 Pfam mTERF 77 290 IPR003690 GO:0003690|GO:0006355
Pral3577g00027 575 FunFam Mitochondrial transcription termination factor family protein 358 571 - -
Pral3577g00027 575 Gene3D Transcription termination factor 3, mitochondrial 112 287 IPR038538 -
Pral3577g00027 575 Gene3D Transcription termination factor 3, mitochondrial 356 574 IPR038538 -
Pral3577g00027 575 SMART mt_12 236 267 IPR003690 GO:0003690|GO:0006355
Pral3577g00027 575 SMART mt_12 413 444 IPR003690 GO:0003690|GO:0006355
Pral3577g00027 575 SMART mt_12 378 408 IPR003690 GO:0003690|GO:0006355
Pral3577g00027 575 SMART mt_12 343 373 IPR003690 GO:0003690|GO:0006355
Pral3577g00027 575 SMART mt_12 485 517 IPR003690 GO:0003690|GO:0006355
Pral3577g00027 575 SMART mt_12 272 302 IPR003690 GO:0003690|GO:0006355
Pral3577g00027 575 SMART mt_12 449 480 IPR003690 GO:0003690|GO:0006355
Pral3577g00027 575 SMART mt_12 307 338 IPR003690 GO:0003690|GO:0006355
Pral3577g00027 575 SMART mt_12 518 549 IPR003690 GO:0003690|GO:0006355
Pral3577g00027 575 PANTHER CGI-12 PROTEIN-RELATED 140 372 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3577g00027 Pral-Chr3577 639709 645500 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral3577g00027 mTERF 3.6e-95 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3577g00027 K15031 - qsa:O6P43_022473 693.345