Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3577g00024 ATGGGGATAGACCTTAAGCAGCCATCAGGAGAATGTCATGATGAAGACAGCTGTAATCCTATTGTTGCTGATTTGGTTGATGGAGCGGATGGTGTAAACAATAGTAATGAACCCAGAAGTTCTTTAAAAGTTGTTGGAAATGATAAGGGGAATGCAGGGCTTGGTATCAATGCTGAATTAGCAAATTTTGGAAATGAAGGGTGCACTGGACAAGGAACCAACTTGAATTCTTCAAAATTACCAGAGCCCCATGATGGGATGGAATTTGATTCAAAGGAGGAAGCATTTTCATATTATAAAGACTATGCAAAATCAGTGGGATTTACTGCTATAATAAAAGCTAGCCGTCGGTCTCAAATATCTGGAAAATTTAATGATGCAAAGTTTGCACGTACCAGATATGGAAACAAGCAAGAACCCTGTGCAACTGAAACTTCAAATTCTCTTTCAAATATAGATAAGATGCCAAGTATTCCTGTAAAAAGGAAACGGGGTAGAGTGAACTTATCTTGGGCAAAGACAGATTGCAAGGCCTGCATGCATGTGAAGAGAAGGCAAGACGATCAATGGATCATCTGTAGTTTCATAAAAGAACATGACCATGAAATTTTTCCTGATCAAGCATATTACTTTAGGGGAAATGGGAATCTAGATCTAAGAAGTAGCAACGGTGATGCATTACAGATTACCAGGGCTAGAACCAAAAAGATGAAGGCTGACAATAGAAAAGGTAGCAGGGGAAACCATTCAGGCAACAGACAGCATCTGGCTTTAGATGAAGCAAATATCCATGCTTTGCTTGACCATTTTATGTGCATGCAAGATGAGAATCCTAATTTCTTTTATGCTGGAGATCTAAATGAAGAGCAGCAATTGAGAAGTGTTTTCTGGGTTGATGCAAAAAGTAGGCTTGATTATAGACACTTTGGTGATGTGATTCTTCTTGACACCACACATATCAAGAATGAATATAAGCTTCCTGTTATTCCCTTTATTGGTGTGAACCACCACTATCAGTTCCTGTTGCTGGGATGTGCAATTGTGTCTGATGAGTCTAAATCAACTTATACATGGCTGCTACAGACATGGTTGAGGGCAATGGGCGGATGTGCTCCAAAGGAATGTCTACAAGGCAACGATCAGAAGTTATAA 1152 0.395 MGIDLKQPSGECHDEDSCNPIVADLVDGADGVNNSNEPRSSLKVVGNDKGNAGLGINAELANFGNEGCTGQGTNLNSSKLPEPHDGMEFDSKEEAFSYYKDYAKSVGFTAIIKASRRSQISGKFNDAKFARTRYGNKQEPCATETSNSLSNIDKMPSIPVKRKRGRVNLSWAKTDCKACMHVKRRQDDQWIICSFIKEHDHEIFPDQAYYFRGNGNLDLRSSNGDALQITRARTKKMKADNRKGSRGNHSGNRQHLALDEANIHALLDHFMCMQDENPNFFYAGDLNEEQQLRSVFWVDAKSRLDYRHFGDVILLDTTHIKNEYKLPVIPFIGVNHHYQFLLLGCAIVSDESKSTYTWLLQTWLRAMGGCAPKECLQGNDQKL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3577g00024 383 Pfam MULE transposase domain 312 374 IPR018289 -
Pral3577g00024 383 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 376 IPR031052 GO:0006355
Pral3577g00024 383 Pfam FAR1 DNA-binding domain 97 205 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3577g00024 Pral-Chr3577 624783 628286 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral3577g00024 FAR1 1.7e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3577g00024 - - pcin:129315780 648.277