Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3577g00018 ATGAAACTGAGAGGCTCAGAAATATTTGCGGAAGAGGAAGAAGATGGGGAGAGAGAGTTTGGTGGAGGAACATATATAAAGAAAGGACCATGGAGTGCTGAAGAAGATGAGATTCTGATGAAACATGTCAAGAAAAACGGTCCAAGGGACTGGAGCTCCATTCGATCCAAAGGGTTGCTTCCCCGGACCGGAAAATCCTGCCGGCTCCGATGGGTTAACAAGCTTAGACCCAACTTGAAGACAGGGTGCAAGTTTTCAGCGGAGGAAGAAAGAGTGGTGATAGAATTGCAGGCACAGTTTGGGAACAAGTGGGCGAAAATAGCGGCTTACTTAGAAGGAAGAACAGACAATGATGTGAAGAATTTCTGGAGCAGTAGGAGAAAGAGGTTGGAGAGAATGTTGCAGAAACCATCTCCATCATCATCATCATCATCAAAGCCACACAATAATAAGAACAAAGCAACATCTATTCATCAGCCACAACCAGTAGTTGAAGAGGTTCCTTCATGCAGTTCAAATCATGTGGAGCAAAACCCATCAGGAAACAAGTTTCTGATGGTTGGTGACACTAAGGAGTTGAAGTTTCAGAATGTGAAAGCAGAGGAAGCCACTCCATTTCACATGGTTCCATCATTTGACTCTTCGTCAGAGTACACTTTTTCTCAGGTACTTCTTCATGATGACTCCCACCACCAAGTGGATGATGGCCTGGTCTGCCATGGCCTGCTTGATCCGGAGCCGTTTGATGCCGCCTTCCTTGACATTTTCGAGCAGCACAAGAAGCCAGGTCTTGCATTGGGAGGAATTGCTCAGAGTTCAATTCCATCAAATGGCTTCTTTGAGGACTTCCCGAGTGACATATTTGACTATTTTGAAGACCTTCCTAACTCGTCAGAAAAATGA 903 0.4507 MKLRGSEIFAEEEEDGEREFGGGTYIKKGPWSAEEDEILMKHVKKNGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSAEEERVVIELQAQFGNKWAKIAAYLEGRTDNDVKNFWSSRRKRLERMLQKPSPSSSSSSKPHNNKNKATSIHQPQPVVEEVPSCSSNHVEQNPSGNKFLMVGDTKELKFQNVKAEEATPFHMVPSFDSSSEYTFSQVLLHDDSHHQVDDGLVCHGLLDPEPFDAAFLDIFEQHKKPGLALGGIAQSSIPSNGFFEDFPSDIFDYFEDLPNSSEK 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3577g00018 300 MobiDBLite consensus disorder prediction 130 183 - -
Pral3577g00018 300 Gene3D - 27 80 - -
Pral3577g00018 300 ProSiteProfiles Myb-like domain profile. 23 75 IPR001005 -
Pral3577g00018 300 MobiDBLite consensus disorder prediction 135 159 - -
Pral3577g00018 300 MobiDBLite consensus disorder prediction 165 183 - -
Pral3577g00018 300 CDD SANT 84 123 IPR001005 -
Pral3577g00018 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 131 IPR017930 -
Pral3577g00018 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 79 IPR017930 -
Pral3577g00018 300 ProSiteProfiles Myb-like domain profile. 84 127 IPR001005 -
Pral3577g00018 300 SMART sant 81 129 IPR001005 -
Pral3577g00018 300 SMART sant 27 77 IPR001005 -
Pral3577g00018 300 FunFam Transcription factor GAMYB 83 156 - -
Pral3577g00018 300 MobiDBLite consensus disorder prediction 1 21 - -
Pral3577g00018 300 SUPERFAMILY Homeodomain-like 26 123 IPR009057 -
Pral3577g00018 300 CDD SANT 30 75 IPR001005 -
Pral3577g00018 300 PANTHER TRANSCRIPTION FACTOR DUO1 22 299 - -
Pral3577g00018 300 FunFam MYB transcription factor 28 80 - -
Pral3577g00018 300 Pfam Myb-like DNA-binding domain 84 124 IPR001005 -
Pral3577g00018 300 Gene3D - 83 159 - -
Pral3577g00018 300 Pfam Myb-like DNA-binding domain 31 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3577g00018 Pral-Chr3577 599147 600804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3577g00018 26 134 MYB Transcription Factor Family AT3G60460 83.486 2.67e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral3577g00018 Myb_DNA-bind_6 6.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3577g00018 K09422 - pcin:129316628 419.853