Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3574g00005 ATGTGCAAAGCAAACATATACAAGGTGAACAGATGGAGGGAAGCTCTGAAACAAGGGTGCCGTGTCTCTGGCCGCCGGAGTAACTCAGATAGGTTTATAGCAGTTTATTACGATGTGGATCCAAAATCCTTTGCTCAACATATTCAACAAGCATGCACACAAGATTCATTTGAGATAACCCAATGGGAGAGGAAGGTTATCGAACTAGTGGCCCCTGTCTGGCAAGTGCGGAATGACTCAGGGTTACAGGTTATTCCAAAAATTGTTAAAGAAGTCAAGTCTAAAATAGATAAACTATTTTATGACTTCTTCGGATTTGTTGGGATGCAATCTCAAGTGGAAGAAGTGGAAAAGCTTTTGGATTTGAATGCAGATGATGAAGTTCGAGTTGTTGGCATTTGTGGTATGAGCGGATTGGGGAAATCTTCTATTGCTACTGTTTTATATCTTAAGATCTTTCACTTTTTTGATGCCTTTTGTTTCCTTCCCAATCTAAGTGGACGTTTAAAGCACGGTGACATAACTCTACAAGAACTTCTGCATAGACATTTGATGACAGAGAATTCAGAGATGAAGGATTTTCTAGACAAAGAGTTCTTACGATGCAAAAGGTTAAGAAAGCACAAGTTTCTTATAGTTCTTGATGGTGTCGATGTTGTACAACATCTACAAGAGTTGAACTTAGTTCAAAAATCCAATTGTTTTGGCGGGGGGAGTAGAATCATTATAACAACTAGAGACGAACAAGTCCTTCAAAAATATGAGGTTAAAACCATTTATAGACCTAAACTTTTGTCCAAGGAGGAAGGTTTCGAACTACTTTGCTCTCAAGCTTTTCAAGGGGGATATCCTATTGGTGAATTCAGAGAGATGATAGATAGGGTGTTGGAATATGCTAATGGCCTTCCATTAGCAATTGAAATATTGGGTTCATCCTTTTTTGGAAAAGGCATTGCAGAATGGAGAAGTTTGCTGGATAGGGAAGAAATTATTCCTCCCTATGAGATCATAAGGGTGCTTAGAAAAAGTTTTGACGAACTTGATCACATGAGTAAGGAAATGTTTTTGGACATAGCATGTTTCTTTGTCGGGAAGGACATTAACTGTGTGAAGGAAATTTTACATGATTGCATCGATTGCTCTGTTGATATAGAAATTCTTATTCAGAAATCAGTCATCACAATTGCAAATGAGAGGATACAAATGCATAGTATGTTGCAAGCAATGGGGCGAGATATTATTCGACGACAATATCCGTATCAACAAAGCCGATTATACCTTTATGGTGACATTAAATCTGTTATGGAGAAGAAAAGAAACACGGTAAGTTTTGACACCACTTTTTAG 1347 0.3794 MCKANIYKVNRWREALKQGCRVSGRRSNSDRFIAVYYDVDPKSFAQHIQQACTQDSFEITQWERKVIELVAPVWQVRNDSGLQVIPKIVKEVKSKIDKLFYDFFGFVGMQSQVEEVEKLLDLNADDEVRVVGICGMSGLGKSSIATVLYLKIFHFFDAFCFLPNLSGRLKHGDITLQELLHRHLMTENSEMKDFLDKEFLRCKRLRKHKFLIVLDGVDVVQHLQELNLVQKSNCFGGGSRIIITTRDEQVLQKYEVKTIYRPKLLSKEEGFELLCSQAFQGGYPIGEFREMIDRVLEYANGLPLAIEILGSSFFGKGIAEWRSLLDREEIIPPYEIIRVLRKSFDELDHMSKEMFLDIACFFVGKDINCVKEILHDCIDCSVDIEILIQKSVITIANERIQMHSMLQAMGRDIIRRQYPYQQSRLYLYGDIKSVMEKKRNTVSFDTTF 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3574g00005 448 Pfam NB-ARC domain 110 325 IPR002182 GO:0043531
Pral3574g00005 448 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 432 IPR044974 GO:0006952
Pral3574g00005 448 Gene3D - 265 355 IPR042197 -
Pral3574g00005 448 Gene3D - 93 259 IPR027417 -
Pral3574g00005 448 SUPERFAMILY "Winged helix" DNA-binding domain 335 434 IPR036390 -
Pral3574g00005 448 PRINTS Disease resistance protein signature 204 218 - -
Pral3574g00005 448 PRINTS Disease resistance protein signature 130 145 - -
Pral3574g00005 448 PRINTS Disease resistance protein signature 299 313 - -
Pral3574g00005 448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 358 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3574g00005 Pral-Chr3574 41118 42906 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3574g00005 107 438 WRKY Transcription Factor Family AT5G45050 31.548 1.82e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3574g00005 - - pcin:129300842 527.709