Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3573g00002 ATGGATCCCCTCACCACCTTTTTCCTTGACTGGTTGACGTTGTCCTTGGCCTGTCGCCATCTTGGTCCTCGTGCTCCTCAACCCGTCGCCGTCGTTCATCGCTGCTTTGTGATCCTCAGTCCGCCGTCTGTCGCGCAGCTCGGCGAACTCCACCAATTTGCAGAGAGCTCCCTCTTCCAGGGTGATGATAACGATTTCTATTCCATGGAGTATTTGGAGAGCAGCTCCTCATCGTTGAAACCGAGTCATGTATATATCAGCTTTAGAGGTGATGAAGAGACTCGTAAATTCATGCATAGCCTTTTGGCTGCTCTGAAAGCAGAAGGCTTCAGAATCTTTGGAGATGATAAGAAGCTTGAAACGCCGGGCTCCAATCTTCCACCTCACCTTCTTCAAGCAATTCGTGAGTCGTGGATTTGGATTGTTGTCTTCTCCAAGAACTATGCTTCTTCATGTTGGTGTTTAAAGGAACTGTCACAGGTTTTGCGCATCATTCTTTCTCAGGATGAATCTCAATTGTCTTGTGCGGACTCATCATCATCAGTTTTTGCGCATCCATTGTACGCTGTCGATGCTGAACGACAAGAAATGTGCGAAGCAGACATAGACAAGGTGAACAGATGGAGGCAAGCTCTGAAACGAGGGTTCCGTGTCTCTGGGCGCTGGAGTGCATCAGATAGGGTTATAGCAGTTTTTTACGATGTGGATCCAAAATCCTTTCCTCAACATATTCAACAAGCATGCACACAAGATTCATTTGAGATAACCCAATGGGAAGATATCGAACAAGTGGCCAGTTCCCCTGGCTGGCAAGTGCGGAATGACTCAGGGTTACAGGTTATTCCAAAAACTGTTAAAGAAGTCAAGTCTAAAATAGATAAACTATTTTATGACTTCTTCGGATTTGTTGGGATGCAATCTCAAGTGGAAGAAGTAGAAAAGCTTTTGGATTTGAATGCAGATGATGAAGTTCGAGTTGTTGGCATTTGTGGTATGAGTGGATTGGGGAAATCTTCTATTGCTACTGTTCTATATCTTAAGACCTTTCACCTTTTTGATGCCTTTTGTTTCCTTCCCAATCTGAGTGGACGTTTAAAGCATGGTGACATAACCCTACAAGAACTTCTGCATAGACATTTGAGGACAGAAAATTCAGAGATGAAGGATTTTCTAGACAAAGAGTTCTTACTAGGGGAAAGGCTAAGAAAGCACAAGTTTCTTATAGTTCTTGATGGTGTTGATCTTGTACAACATCTACAGGAGTTGAACTTAGTTGAAAAATCCAATTGTTTTGGCGGGGGGAGTAGAATCATTATAACAACTAGAGATGAACAAGTCCTTCAAAAATATGAGGTTAATACCATTTATAGACCTAAACTCTTGTCCAAGGACGAAGGTTTCAAACTATTTTGTTCTAAAGCTTTTCTAGGGGGATATCCGATTGATGATTTCGAAGGGATGATATATAGGGTGTTGGAATATGCTAATGGCCTTCCATTAGCAATTGAAATATTGGGTTCATCCTTTTTTGGAAAAGGCGTTGCAGAATGGAGAAGTTTCCTGGATAGGGAAGAAATTATTCCTCCCTATGAGATCACAAGGGTGCTTAGAAAAAGTTTTGACGAACTCGATGACATGAAAATTCTTTTTCAGAAGTCGGTCATCACAATTGCAAATGAGAGGATACAAATGCATAGTATGCTGCAAGCAATGGGGCGAGATATTATTCGACAGCAATATCCGTATCAACAAAGCCGATTATACCTTTATAGTGACATTAAATCTGTTATGGAGAACAAAAGAAACATGGTGATGGAAAATGTTGAAGCTCAGCCAGATGATAGCGAATCTGATATGGGGAGAGAGAGAGAGACATGGGTGATGGAAAATGATGAAGCTCAGCCAGATGACAGCGAATCTGATATTGAGAGAGAGAGATACACATGGCTGATGGAAAATGTTGAAGCTCAGCCAGATGACAGCGAATCTGATATTGAGAGAGAGAGATACACATGGGGGATGGAAAATGTTGAAGCTCAGCCAGATGACAGCGAATCTGATATTGAGAGAGAGAGACACGCATGGATGCGTTTATACTCCCTGGGGATGGAAAATGTTGAAGCTCAGCCAGATGACAAGGAATCTGATATTGAGAGAGAGAGACACGCATGGATGCGTTTATACTACCAGGGGATGGAAAATGTTGAAGCTCAGCCAGATGACAGCGAATCTGATATTGAGAGAGAGAGATACGCATGGGTGATGGAAAAAGTTGAAGCTCAGCCAGATGACAGCGAATCTGATATTGAGAGAGAGAGATACCCGTGGCAAGTGACGGAAAATGTTGAAGCTTGGTCAAATGACAGCGAATCTGATATTAAGAGAGAGAGATACGAACGGGTGATGAAAGTTGAGGCTCTGCCAGTTCACGTCAACTCTGTTTTTGAGAGATATAGATACACATGGATGGTGGAAAAAGTTGAAGCTATAGCCTTGGATTTGGAAGAGCCAAAAATGGCCTCATTGAGGGTTGATGCTTTATCAGATATGATCAACCTTAGATTGCTGATATTCCGTAACGTGGAATTTTCTGGAACCCTTAGTAATCTTTCAAGCAAGTTGCGATATGTTTCGTGGCATCAATATCCTTTCACTTCTTTGCCATCGGGTTTTCAATCTGACACACTTGTTCAACTGATTATGGCTGAAAGCAACATGACAGAAGTGTGGAAGGGCAGAATGATGCTCCCTACTTTGAGAAAACTGAATCTAAGTGGCTCCAAAGCTTTGACAAAGACGCCAGATTTTGGTGGGGTTCCAAATCTTGAGAAGCTAGAGCTCGAAGGATGTACTGGATTGTTGCAACTTGATCCATCTGTTGCTCAACTTCCAAAGCTCAGATTCTTGAACTTGAAAGGTTGCATCAATCTTGTCAGTATCCCTAATTCCATGTTTTGTCTGAACTCGTTGGAAGTCCTAAATCTAGCTGGCTGCTCTAAACTTGCATGTTGCTTGAAGTTTTCTCCAATGAGGAGTTTGATACAAGTGAAACTGCTTGGCATCTGGGATAGTCCATTCTTGGAAAAAATTTTGTACTTTCTTCTGTTGGTTTTGCCAGAACAAAAGAGATATCATGACTTCGTTTCTTCTTGTCTTATTTACTTGATGTGTATTTGTGAGGTCAAATATGTATAA 3195 0.4191 MDPLTTFFLDWLTLSLACRHLGPRAPQPVAVVHRCFVILSPPSVAQLGELHQFAESSLFQGDDNDFYSMEYLESSSSSLKPSHVYISFRGDEETRKFMHSLLAALKAEGFRIFGDDKKLETPGSNLPPHLLQAIRESWIWIVVFSKNYASSCWCLKELSQVLRIILSQDESQLSCADSSSSVFAHPLYAVDAERQEMCEADIDKVNRWRQALKRGFRVSGRWSASDRVIAVFYDVDPKSFPQHIQQACTQDSFEITQWEDIEQVASSPGWQVRNDSGLQVIPKTVKEVKSKIDKLFYDFFGFVGMQSQVEEVEKLLDLNADDEVRVVGICGMSGLGKSSIATVLYLKTFHLFDAFCFLPNLSGRLKHGDITLQELLHRHLRTENSEMKDFLDKEFLLGERLRKHKFLIVLDGVDLVQHLQELNLVEKSNCFGGGSRIIITTRDEQVLQKYEVNTIYRPKLLSKDEGFKLFCSKAFLGGYPIDDFEGMIYRVLEYANGLPLAIEILGSSFFGKGVAEWRSFLDREEIIPPYEITRVLRKSFDELDDMKILFQKSVITIANERIQMHSMLQAMGRDIIRQQYPYQQSRLYLYSDIKSVMENKRNMVMENVEAQPDDSESDMGRERETWVMENDEAQPDDSESDIERERYTWLMENVEAQPDDSESDIERERYTWGMENVEAQPDDSESDIERERHAWMRLYSLGMENVEAQPDDKESDIERERHAWMRLYYQGMENVEAQPDDSESDIERERYAWVMEKVEAQPDDSESDIERERYPWQVTENVEAWSNDSESDIKRERYERVMKVEALPVHVNSVFERYRYTWMVEKVEAIALDLEEPKMASLRVDALSDMINLRLLIFRNVEFSGTLSNLSSKLRYVSWHQYPFTSLPSGFQSDTLVQLIMAESNMTEVWKGRMMLPTLRKLNLSGSKALTKTPDFGGVPNLEKLELEGCTGLLQLDPSVAQLPKLRFLNLKGCINLVSIPNSMFCLNSLEVLNLAGCSKLACCLKFSPMRSLIQVKLLGIWDSPFLEKILYFLLLVLPEQKRYHDFVSSCLIYLMCICEVKYV 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3573g00002 1064 Gene3D Ribonuclease Inhibitor 803 1015 IPR032675 -
Pral3573g00002 1064 SUPERFAMILY L domain-like 831 1022 - -
Pral3573g00002 1064 Pfam NB-ARC domain 306 520 IPR002182 GO:0043531
Pral3573g00002 1064 SUPERFAMILY Toll/Interleukin receptor TIR domain 73 169 IPR035897 -
Pral3573g00002 1064 Gene3D - 295 455 IPR027417 -
Pral3573g00002 1064 ProSiteProfiles TIR domain profile. 80 239 IPR000157 GO:0007165
Pral3573g00002 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 296 545 IPR027417 -
Pral3573g00002 1064 MobiDBLite consensus disorder prediction 610 641 - -
Pral3573g00002 1064 SMART till_3 81 221 IPR000157 GO:0007165
Pral3573g00002 1064 MobiDBLite consensus disorder prediction 614 630 - -
Pral3573g00002 1064 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 83 1003 IPR044974 GO:0006952
Pral3573g00002 1064 PRINTS Disease resistance protein signature 326 341 - -
Pral3573g00002 1064 PRINTS Disease resistance protein signature 985 1001 - -
Pral3573g00002 1064 PRINTS Disease resistance protein signature 495 509 - -
Pral3573g00002 1064 PRINTS Disease resistance protein signature 400 414 - -
Pral3573g00002 1064 Gene3D - 74 294 IPR035897 -
Pral3573g00002 1064 Pfam TIR domain 84 172 IPR000157 GO:0007165
Pral3573g00002 1064 Gene3D - 460 544 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3573g00002 Pral-Chr3573 15819 22085 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3573g00002 813 997 WRKY Transcription Factor Family AT5G45050 33.505 2.67e-17 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3573g00002 - - pcin:129300842 580.482