Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3572g00011 ATGGTGTTATATCTTAAGATATTTCATCATTTTGATGCCTTTTGTTTTCTTCCCTCTGTAAGTCGACGTCTAAAGCAAGGTGACATAACTCTACAAGAACTTCTTCAGAGACATTTGGGGACAGAAAATTCAGAGGTGAGGGATTGTCTAGACAAAGAGTTCTTAGCTTGCAAAAGATTAAGAAACCACAAGTTTCTTATAGTTCTTGACGGTGTCGAGCTTGTAAAAGATCTCCAAGAGCTGAACTTGGTTGAAAAATCCAATTGCTTTGGCGGGGGAAGTAGGATCATTATAACAACTAGAGATAAACAAGTCCTTCAAAAGTATGAGGTTGATACAGTTTATAGACTTAAGCCTTTGTCTGATGATGAGGCTTTCGAACTATTTTGTTCTGAAGCTTTTCCAATGGAATATCCTGTTAGTGATTTCCAAGAGATGATAAATAAGGCATTGGAATACGCTAAAGGCCTTCCGCTAGCAATTAAAATATTGGGTTCAACCCTTTTTGGGAAAGGCGTTGCAGAATGGAGAAGTGTCCTGGATAGAGAGGAAATCATTCCCCCTTATGATGTCATAATGATGCTTAGAGAAAGTTTTGATGAACTCGATGATATGAGTAAGGAAATGTTTTTGGACATAGCATGTTTCTTTGTAGGGAGGGACGTTAATTATGTGAAGGAAATTTTACATGATTGCATCAGCTGCTCTGTGGATATAGAACTTCTTATTCAAAAATCACTTATCACAATTGTAAATCAGAAGATACAAATGCACGGTATGTTGCAAGCAATGGGACGAGAAATTGTTCGAAAACAATGTCCAAATCAGCCAGCTAAACGACGTCGGTTATATCTTTATGGTGACATCGAATATGTTATGGAGGATGGAATATACGAGGTGATGGAAAATGTGGAAGCTATAGCCTTGGATTTGGAAGAGCCGAAAGGGGTTGCATTGAGGAGCGATGCTTTAGCAAATATGATCAATCTTAGACTGCTCATATTTCGTAATGTGGAATTTTATGGGAACCTCGAC 1035 0.3807 MVLYLKIFHHFDAFCFLPSVSRRLKQGDITLQELLQRHLGTENSEVRDCLDKEFLACKRLRNHKFLIVLDGVELVKDLQELNLVEKSNCFGGGSRIIITTRDKQVLQKYEVDTVYRLKPLSDDEAFELFCSEAFPMEYPVSDFQEMINKALEYAKGLPLAIKILGSTLFGKGVAEWRSVLDREEIIPPYDVIMMLRESFDELDDMSKEMFLDIACFFVGRDVNYVKEILHDCISCSVDIELLIQKSLITIVNQKIQMHGMLQAMGREIVRKQCPNQPAKRRRLYLYGDIEYVMEDGIYEVMENVEAIALDLEEPKGVALRSDALANMINLRLLIFRNVEFYGNLD 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3572g00011 345 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 337 IPR044974 GO:0006952
Pral3572g00011 345 SUPERFAMILY "Winged helix" DNA-binding domain 191 291 IPR036390 -
Pral3572g00011 345 PRINTS Disease resistance protein signature 59 73 - -
Pral3572g00011 345 PRINTS Disease resistance protein signature 154 168 - -
Pral3572g00011 345 Pfam NB-ARC domain 7 181 IPR002182 GO:0043531
Pral3572g00011 345 Gene3D - 119 203 IPR042197 -
Pral3572g00011 345 Gene3D - 2 114 IPR027417 -
Pral3572g00011 345 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 213 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3572g00011 Pral-Chr3572 158889 160025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3572g00011 11 333 WRKY Transcription Factor Family AT5G45050 31.361 9.64e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3572g00011 - - pcin:129300842 442.965