Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3572g00004 ATGATGATGCCCGTTTTATTGGCATTTGGGCTATGGGCGGGAAGTGGAGCCATTAAAGGCATAACTTTGAATGTTTCAGAAGTTGAAGAGATGTGCTTAAGTCCTCAAGTCTTTCGTTCAATGCCCAATCTAATGTTTCTAAATTTTTATAAAAATTACAATAACCAGGTCGGGAACAAGTTAAAATTACCCAATGGTTTGGAGTTTTTACCAAATAAAATCAGACTATTAGGTTGGGTGGGATACCCTTTAAAGTCCTTGCCAACAACATTCAAGGTTGAAAATCTCGTTCAAATTGAAATGAACTTCAGCAAGTTGACAAAACTGTGGGATGGAGACCAGAATCTTGTGAGTTTAAAGAAAATTGAACTCCACGGGCCAAAAAAGTTGATTGAGCTCCCAAATTTTTCCAAGGCCAAACATCTTGCAGAAGTTAATCTCGATTATTGTTCAAAATTACGTGAATTATTTGAAGTTCCTGACAACATCGGCTTGTTGTCATCAATACGTGAGTTACATCTCTCAGAAACTAATATAGAGACCTTGCCTTTAAGCACCAGACATCTTTCGAGGCTACAAGAGCTTTACTTGGATAGATGCAAAAGGCTTCGGTCTCTACCAGAACTCCCTCCCTCCCTCCCTCTTGACACTGTCCGCCAATAA 663 0.3922 MMMPVLLAFGLWAGSGAIKGITLNVSEVEEMCLSPQVFRSMPNLMFLNFYKNYNNQVGNKLKLPNGLEFLPNKIRLLGWVGYPLKSLPTTFKVENLVQIEMNFSKLTKLWDGDQNLVSLKKIELHGPKKLIELPNFSKAKHLAEVNLDYCSKLRELFEVPDNIGLLSSIRELHLSETNIETLPLSTRHLSRLQELYLDRCKRLRSLPELPPSLPLDTVRQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3572g00004 220 Pfam Leucine Rich Repeat 95 114 IPR011713 -
Pral3572g00004 220 SUPERFAMILY L domain-like 22 213 - -
Pral3572g00004 220 Gene3D Ribonuclease Inhibitor 19 219 IPR032675 -
Pral3572g00004 220 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 210 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3572g00004 Pral-Chr3572 55549 58151 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3572g00004 13 207 WRKY Transcription Factor Family AT4G12020 28.689 1.04e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3572g00004 - - ccaj:109805840 162.155