Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3572g00002 ATGGCGTATTCTTCTCAGTGTTCTGGGATAAAATATGATGTCTTTATCAGCTTCAGAGGCACAGACACTCGCCATGGTTTTCTTAGTCATTTGAGGAAGGAATTGCGGCAGAAGCAAATTGATGCCTATGTGGACGACAGACTTGAAAGTGGAGATCCAATATCACCGGCACTTTTAAACGCCATCAAAGAATCACTCATGTCATTGATCATATTTTCGAAGGATTATGCTTCTTCAAGGTGGTGCTTAGAAGAGCTGGTGCAGATTATTGAGTGTATGGAGAAGCAAAAACAGATTGTAATTCCCGTTTTCTATAACACAGATCCCTCAGATGTGAGGCATCAAAAAGGATCTTATGGAGATGCTTTTGTCAAACATGACAAAAATTACAAGGAAAAGGTGCCAATTTGGAAATCAGCTTTGAATAAAGCGGCTAACTTGTCTGGGTTTCATTCATCAAGTTACGAGGACGAGGCTGAGCTTATAGAAAAAATTGCCAAGCGTTTGTCGACAAGGTTGAATATTATGTTCCAAAGTGACTTAACAGGCCTCGTTGGAATTGATGAAAGGATTGCAGATTTAGAATCACTAATGAACCAAGGCTCAAAAGATGTTCGAGTCATTGGAATTTGGGGTATGGGCGGTATGGGTAAGACAACTATCGCAACTGCAGTATTTAATCGATTCTGTTCTGAATATGAAGGATATTATTTTTTGGCAAATGTGAGAGAAGAATCAGAGAATCATGGGATTATCTATTTGAAGAATAAAATTCTTTCTATACTGCTCAAGGAAAATGATTTGCATATTGGTACACCAAATGGAATACCACCTTATGTTAAGAGAAGGCTTCTTCGAAAAAGAGTTCTTGTTGTTCTTGATGATATTAGTGATTCTGATCAACTGGAAAATTTAGTGGGAGCACTTGATTGCTTTGGATCGGGTAGCAGAATCATTATAACAACAAGGGATAGGCAAGTTCTAGCTAAAGGAGTTGATGAAATATACGAAGTTAAGCCTTTGATATTTGATGATGCTGCTCAACTTTTTATGTCAAATGCCTTTGGGAATAATTATCTTGACATGGAGTGGATTGAATTATCAAGGAAGGTGATCAGTTATGCTAAAGGCGTTCCATTGGCTTTGAAGGTTTTGGGTTCCTTTCTTTATGGCAAAAGCAAGGAAGAATGGGAGAGCCAACTTGAGAAGCTCAACAAAATGCCACATGCAAAGATTCAGGATGTGATGAGATTGAGTTATGATAAACTTGATAGGGAAGAGAAGAATATTTTCTTGTATATTGCTTGTTTCTTCAAAGGATATAAATCACGGCAAGTAATACTTTTTCTAAATGCTTGTGGTTTTTCAACAATTATTGGGTTAAAAGTCCTTGAAGACAAAGCTCTTATCACTGAAATCAAAGGATCCAACGCAGGAGCATCAAAAATCTTTATGCATGATTTGATAGAGGAAATGGGTTGGGAGATTGTTCGTGAAGAATCAATTCATGATCCTGGAAAACACAGTCGGTTATGGGATGCTAATGATATGTGTCGAGTATTGGAACATAATCTGGGGACTAAAGCCATTCAAAGCATAACTTCGAATGTGACAAAAATTGAAGAGCTCTGCTTAACTCCCCAGGTCTTTGCCGAGATGTCTGAGCTAAAACTTCTTAGTTTTCCCCAGAATGATGTCAATGGACAAATCCTATGCCTTCCTTGTGGCCTTGAATCTTTGCCGTATGAACTGCGATTTCTTCATTGCGGTTGCTGTCCTTTAAAATCCTTACCTTCCACATTCCGTCCAGAAAGTCTCGTTGAACTTAACATGACTTGGAATCGTGTGGAAAAACTTTGGGATGGAGTTCTGCGTCTTGTGAATTTGAAGAAGATTGACCTCAGTAACTCCAAGCATCTGTTGGAACTCCCAGATTTTTCTATGGCCAGAAACCTTCAAGAAGTTGTACTCTACAACTGTAAAAGCTTGCGTAAGGTTCATCCTTCTATTTTAACCATCCACAAGCTTGTGAATTTGAACCTATCGTATTGCAAATCACTTACCAGCCTTAGAAGTGATGTACATTTGAGATCCCTGAGTAGTCTTTCTCTTGGTGAATGCTCAAGGCTCAGGGAATTCTCAGTGACATCAGAGAATATGAGGAACTTGAGTTTGGCAGGCACAGCTATCAATGAATTGCCTTCATCCATCAGGCTTCTAAACAAACTTGAAACATTCGACTTACATCGTTGCAAAAAGCTTAAGAATCTTCCAAACAAGTCAGCTAACCTAAGTTCTCTTCGAGAACTTTGGATATATGGTTGCGTGCAGATTGATGCCTCGAATTTACGCTTCCTACTTGATGGCTCAAGATTCTTAGAAACATTGGTACTGCAAGATTGTCATAATTTATTTGAACTTCCAGACACCATCAGATTCTTATCCTCATTGAAACATTTATCCCTAAATGAAACTGATATTAAGAGGTTGCCTGCAAGCATCAAGCATCTTCCACAACTTGAAAAACTTGATTTGAGTAATTGTAGGAAGCTTCAGTCTTTGCCTCATCTTCCACTAACCGTTAAAGAACTATATCTCACTAACTGCACTTCCCTGGAGAGAGTCATGTTTTCTTCAATGGCTTCTGATCATCTGAAGGGAAAAATGAGATATAGCACTAGTTTCCAGAATTGCGTGAACTTGGATGCACATTCACTCAGAGCTATAGAAGTAAATTCTCATGTCAACATTAAGAGATTGGCCATTGAACATTTATCAACTCTAGAAAAAAGTAAGATCCTAGGTGGTCCAGTTGATGTCATTTATCCAGGAAGCAATGTTCCGGAGTGGTTCACTAACAGGACAAGGCAGTCATCAGTAACTATTGACTTATCTTCTGCTCCACCTTCCATGTTCGTGGGTTTCATTTTTTGTGTGGTTGTCTGTAAGTTTCCATCAGATGACAAGAACCTTGTCGGATGTGACTGCTACATGGAAATTAATGGTAAAAGAGACAAGAATATGGGTGCTTGGACTAGCATATCTGCTTGTGAATTTATGTCTGATCATGTATGTCTGTGGTATGATGAACGATGTTGTCTGAAAACTAATGAAAGCAAGGAGGAAGATGAAAGTAATCGCAAGAAAATATCATTTGAGTTCTTTGCACAAACTGGGGATATTTGGAAGAAGAGCAAGGATATTGTGATAAAAGAGTGTGGAGTCTGCCCCATATATGCCTCAGAATATGATAAATTCATTGAGCAAATGGAGTTGGAGTTGAAATCAGAGCTTAAAGCAATTGCAATAGGAGTTAGTGGAAGCTTTGATGAAAAGAAAATTGAGGAGACAGTCCCTTTTGTTAAAAAATCCAATCGATTTATCTTTCCTCCCCTTGCAAATGGAACTTGGAAGAAAGCAACACAAGGCTTAAAAGATCTCATCAAATTGTGA 3453 0.3849 MAYSSQCSGIKYDVFISFRGTDTRHGFLSHLRKELRQKQIDAYVDDRLESGDPISPALLNAIKESLMSLIIFSKDYASSRWCLEELVQIIECMEKQKQIVIPVFYNTDPSDVRHQKGSYGDAFVKHDKNYKEKVPIWKSALNKAANLSGFHSSSYEDEAELIEKIAKRLSTRLNIMFQSDLTGLVGIDERIADLESLMNQGSKDVRVIGIWGMGGMGKTTIATAVFNRFCSEYEGYYFLANVREESENHGIIYLKNKILSILLKENDLHIGTPNGIPPYVKRRLLRKRVLVVLDDISDSDQLENLVGALDCFGSGSRIIITTRDRQVLAKGVDEIYEVKPLIFDDAAQLFMSNAFGNNYLDMEWIELSRKVISYAKGVPLALKVLGSFLYGKSKEEWESQLEKLNKMPHAKIQDVMRLSYDKLDREEKNIFLYIACFFKGYKSRQVILFLNACGFSTIIGLKVLEDKALITEIKGSNAGASKIFMHDLIEEMGWEIVREESIHDPGKHSRLWDANDMCRVLEHNLGTKAIQSITSNVTKIEELCLTPQVFAEMSELKLLSFPQNDVNGQILCLPCGLESLPYELRFLHCGCCPLKSLPSTFRPESLVELNMTWNRVEKLWDGVLRLVNLKKIDLSNSKHLLELPDFSMARNLQEVVLYNCKSLRKVHPSILTIHKLVNLNLSYCKSLTSLRSDVHLRSLSSLSLGECSRLREFSVTSENMRNLSLAGTAINELPSSIRLLNKLETFDLHRCKKLKNLPNKSANLSSLRELWIYGCVQIDASNLRFLLDGSRFLETLVLQDCHNLFELPDTIRFLSSLKHLSLNETDIKRLPASIKHLPQLEKLDLSNCRKLQSLPHLPLTVKELYLTNCTSLERVMFSSMASDHLKGKMRYSTSFQNCVNLDAHSLRAIEVNSHVNIKRLAIEHLSTLEKSKILGGPVDVIYPGSNVPEWFTNRTRQSSVTIDLSSAPPSMFVGFIFCVVVCKFPSDDKNLVGCDCYMEINGKRDKNMGAWTSISACEFMSDHVCLWYDERCCLKTNESKEEDESNRKKISFEFFAQTGDIWKKSKDIVIKECGVCPIYASEYDKFIEQMELELKSELKAIAIGVSGSFDEKKIEETVPFVKKSNRFIFPPLANGTWKKATQGLKDLIKL 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3572g00002 1150 Pfam Leucine rich repeat 793 849 IPR001611 GO:0005515
Pral3572g00002 1150 Pfam TIR domain 11 186 IPR000157 GO:0007165
Pral3572g00002 1150 Gene3D - 7 176 IPR035897 -
Pral3572g00002 1150 Pfam NB-ARC domain 195 422 IPR002182 GO:0043531
Pral3572g00002 1150 SUPERFAMILY L domain-like 485 900 - -
Pral3572g00002 1150 Gene3D Ribonuclease Inhibitor 507 718 IPR032675 -
Pral3572g00002 1150 Gene3D Ribonuclease Inhibitor 719 914 IPR032675 -
Pral3572g00002 1150 SMART till_3 11 147 IPR000157 GO:0007165
Pral3572g00002 1150 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 150 IPR035897 -
Pral3572g00002 1150 Gene3D - 177 334 IPR027417 -
Pral3572g00002 1150 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 175 - -
Pral3572g00002 1150 ProSiteProfiles TIR domain profile. 10 173 IPR000157 GO:0007165
Pral3572g00002 1150 PRINTS Disease resistance protein signature 835 851 - -
Pral3572g00002 1150 PRINTS Disease resistance protein signature 283 297 - -
Pral3572g00002 1150 PRINTS Disease resistance protein signature 207 222 - -
Pral3572g00002 1150 PRINTS Disease resistance protein signature 375 389 - -
Pral3572g00002 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 434 IPR027417 -
Pral3572g00002 1150 Gene3D - 341 424 IPR042197 -
Pral3572g00002 1150 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 761 IPR044974 GO:0006952
Pral3572g00002 1150 Pfam C-JID domain 942 1082 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3572g00002 Pral-Chr3572 9989 14066 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3572g00002 3 850 WRKY Transcription Factor Family AT4G12020 33.064 1.35e-111 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3572g00002 - - ccaj:109805840 1483