Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3572g00001 ATGGCTTCGTCTTCTTCCTCTACTCCATCTTCTCAATCTCCAAAGAAATATGATGTTTTTATTAGCTTTAGAGGTGAGGACACCCGCTTCAATTTCACTAGCCACCTTCATGAAGCACTTCGTAGAAACCATGTAGATACATACATCGACTACAGACTTGAGAAAGGAGATGAGGTATGGCCATCTCTTGAGAAAGCCATCGAAGATTCAACTCTCTTCCTTGTGATCTTCTCAAAAAACTATGCATCTTCCACGTGGACCTTGAAGGAGCTTTCAAAAATATTAGACTGCTCCAAAAATCAAGGTCACCAGCTTGTTATGCCAGTGTTCTATAGAGTAGATCCTTCACATGTGAGGAAGCAGTCTGGGAGTTACCAGAAAGCATTTGAAGAACATGAGCTTAAAAGCATCAACAACCAACATCTACACATGTGGAGGAAGGCTCTCACTCATGCTGCCAATTTATCTGGTTGGCATTGTAGCTTCGATAGGGATGAAGCGGAGCTAATTAAAGAAATAGTGAAATGTGTTATACACAAGTTAGGCTGTAATTATCAAAGTGAAGATTATCTAAAAGATTTGATCGGAATTCAGAAAAGAATGGCAGATGTAGAATCATTGTTAGAAAAAGATTCAAATGATGATGTGCGATTTATTGGCATTTGGGCTATGGGTGGTATGGGCAAAACGACTCTTGCAAAAGCATTGTTTAGCAAATTGCGTTTTGGATATGAAGGGTCTTACTTTTTGGCTAATGTAAGGGAAGAATCAAAGAAATGTGGAATAGATGCTCTGAGGGAAAAGCTCATTTTGAAGTTATTAGGGGATAAAGAATCTCACATTGACATGGTTGATGGTGCAATATCTTCTTATGCCATGAGGAGACTTAGCCGCAAAAAAAGTTTCGTTGTTCTTGATGATGTTGATGATCTTGAACAATTAGAAAAATTAGCAGGAAAACATGATTGGTTTGGACCAGGTAGTAAAATATTGATAACAACCAGAGATAAGCAAGTTTTTGGTAAGGAAGTAGATGATATATATCAGCTTGAGGCTTTGAATTCTGATGAGGCTTTTCAACTTTTCTCCTTAAATGCCTTCAAAAAACACTATGATGGTGATCCAAAGATACGAGAGCTGGTAGAAAAAATTACTCACTATGGAGGTGGAAATCCATTGGCCTTAAAAGTTTTAGGTTCCTTTTTGTATGGCAAAAATCAAGAAGCATGGCAGAGCCAATTGGAAAAGCTTACAAAATTACCTTGTCCAAAAATTAATGATATCCTCAAATTGAGTCTTGAAGAACTTGATTCTGAAGAGAAAATTTCTTGTTTTGATAGAAATTTGGATTATCAGTTCAGGAACAAGTTAAACTTTCCCTGTGGTATAGAGTTTTTACCAAAAAATCTCAGACTCTTGCATTGGGTGGGATACCCTTTAAAGGCCTTGCCAGCAAAATTCGAGATTGAAAATCTTGTTCAAATTATAATGCCTCATAGCAATTTGACAAAACTTTGGGATGGAGTGCAGAATCTCGTGAATTTACGTGGAATTAACCTCCATGGATCAAAAGACTTGATTGAGCTCCCAAATTTTTCCAAGGCAATACATCTTGCAGAAGTGAATCTCAATGATTGTTCAAAATTGCAGGGTGTTCATCCATCTATTTTATCCCTCAATAGTCTTTGTTATTTAAGACTAAGAGGTTGTGAAGCCCTTACCAACCTTACAAGCAATACCCATCTCCAATCACTAGAGTATCTGGACCTAACAGAATGCTCAAGATTGAACAAATTTTCAGTGACCTCAGAAAACAGTGGGTTTGAATTGATACTTTCGGGAACGGCCATCAATGACGAGTTGTGCTCATCAAGTGGACGTCTCAGCAAAATTGGTTCATTGTTTCTAGACGAATGCAAAAGTGTGAAAAGTCTTCCCTACAAATTGGTTGACTTGCGCAACCTCGGACGTCTTGATGCTAACGGATGTAATAAGGTAGCATCAAATCTACTTTCCATATTTGATGAGATGCGTGCTTTGGAAGTTCTATATCTAAATGATTGTAGTGAATCATTTGAAGTTCCTGATAACATCAGCTTGTTATCGTCATTGCGTACGTTAAGTTTGTCAAGGAGTAATATAGAGACATTGCCTTCAAGCATCAAACACCTTTCGAGCCTGAAAGAACTTAACGTAAATAGATGCGAAAGGCTTCGGTCCCTACCAGAACTACCTCCCTCTATCTTAGACCTATCTGCCAGGGACTGCCTATCCCTTGTGTCCCTACAGTTACCTTTAATGAGAGAAGATGGAGAACAAAAAGAAGATCAAACAAAACTGTGCTTTGCTTTCACTAGTTGCATGAAGTTGGATCAACAATCAATCAAAGCTTGCGAGGCAAAAGTGGTACACGAGATAAGTAAAGCCACTTGTTGCGGGGCTTATGTGGAATATCCAGGAGAAAGAGTTCCAGATTGGTTCATGTATAGGTCTATACGGTCATCTGTCATAACTGTGGATCTCCGTTCTATTCCACAACCTTGGGATGGCTGTTTCATTTTCTGCGTCGTCATTTTGAAGTCACCACCGATGGCAGCAGTTGACGCCAAATGCTTTATTGATGGTCAATATGCTTGCACGTATGAAGGTGGGTTTATCTATGATCCTCTATTGTCAGATCATGTTGTCATTTGGTACGACGCATGTTCTTGTGGAGAACTACAAAGAAAAATTGAAGAGAAGAAAAGGGATGCTCACAGCGACACTTATATCCCATTGCTTCAAATTCAATTCACAGTTGCTGCATTAATAAGAGGAGAGATCAAAGAGTGTGGGGTATGTCCCACATCAGCACTACTTGAATATCAAAATTACATTCAACAAATTCGATTGCCATTGCATCCACATCCTAGCTCTGATACAATGCAAACGCCGTCTCGAAAGCGCAAATATCACAGCTTACTTCGTTGA 2970 0.3892 MASSSSSTPSSQSPKKYDVFISFRGEDTRFNFTSHLHEALRRNHVDTYIDYRLEKGDEVWPSLEKAIEDSTLFLVIFSKNYASSTWTLKELSKILDCSKNQGHQLVMPVFYRVDPSHVRKQSGSYQKAFEEHELKSINNQHLHMWRKALTHAANLSGWHCSFDRDEAELIKEIVKCVIHKLGCNYQSEDYLKDLIGIQKRMADVESLLEKDSNDDVRFIGIWAMGGMGKTTLAKALFSKLRFGYEGSYFLANVREESKKCGIDALREKLILKLLGDKESHIDMVDGAISSYAMRRLSRKKSFVVLDDVDDLEQLEKLAGKHDWFGPGSKILITTRDKQVFGKEVDDIYQLEALNSDEAFQLFSLNAFKKHYDGDPKIRELVEKITHYGGGNPLALKVLGSFLYGKNQEAWQSQLEKLTKLPCPKINDILKLSLEELDSEEKISCFDRNLDYQFRNKLNFPCGIEFLPKNLRLLHWVGYPLKALPAKFEIENLVQIIMPHSNLTKLWDGVQNLVNLRGINLHGSKDLIELPNFSKAIHLAEVNLNDCSKLQGVHPSILSLNSLCYLRLRGCEALTNLTSNTHLQSLEYLDLTECSRLNKFSVTSENSGFELILSGTAINDELCSSSGRLSKIGSLFLDECKSVKSLPYKLVDLRNLGRLDANGCNKVASNLLSIFDEMRALEVLYLNDCSESFEVPDNISLLSSLRTLSLSRSNIETLPSSIKHLSSLKELNVNRCERLRSLPELPPSILDLSARDCLSLVSLQLPLMREDGEQKEDQTKLCFAFTSCMKLDQQSIKACEAKVVHEISKATCCGAYVEYPGERVPDWFMYRSIRSSVITVDLRSIPQPWDGCFIFCVVILKSPPMAAVDAKCFIDGQYACTYEGGFIYDPLLSDHVVIWYDACSCGELQRKIEEKKRDAHSDTYIPLLQIQFTVAALIRGEIKECGVCPTSALLEYQNYIQQIRLPLHPHPSSDTMQTPSRKRKYHSLLR 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3572g00001 989 Pfam Leucine Rich Repeat 491 510 IPR011713 -
Pral3572g00001 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 441 IPR027417 -
Pral3572g00001 989 MobiDBLite consensus disorder prediction 967 989 - -
Pral3572g00001 989 SMART till_3 16 155 IPR000157 GO:0007165
Pral3572g00001 989 Gene3D Ribonuclease Inhibitor 608 791 IPR032675 -
Pral3572g00001 989 Pfam TIR domain 16 194 IPR000157 GO:0007165
Pral3572g00001 989 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral3572g00001 989 PRINTS Disease resistance protein signature 295 309 - -
Pral3572g00001 989 PRINTS Disease resistance protein signature 580 596 - -
Pral3572g00001 989 PRINTS Disease resistance protein signature 218 233 - -
Pral3572g00001 989 PRINTS Disease resistance protein signature 388 402 - -
Pral3572g00001 989 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Pral3572g00001 989 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 457 648 IPR044974 GO:0006952
Pral3572g00001 989 Gene3D - 14 186 IPR035897 -
Pral3572g00001 989 Pfam NB-ARC domain 203 436 IPR002182 GO:0043531
Pral3572g00001 989 Gene3D - 187 346 IPR027417 -
Pral3572g00001 989 SUPERFAMILY L domain-like 445 756 - -
Pral3572g00001 989 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Pral3572g00001 989 Gene3D - 352 435 IPR042197 -
Pral3572g00001 989 Gene3D Ribonuclease Inhibitor 436 607 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3572g00001 Pral-Chr3572 3960 8396 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3572g00001 9 759 WRKY Transcription Factor Family AT4G12020 25.921 3.58e-44 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3572g00001 - - pcin:129290880 592.808