Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3571g00026 ATGGCTGGAGAGATGTGTGACGACAAGCCCAGGGAGATGGTATCATCGTCAGCTGGATTCTGCTACTCCGAGGTATCAACGGGCAACCCAGGGATCCAAAGCCATATGGGGAATCATCAGATCCAAGGGTTTGAATCCGACCCGGACATGTTCAGCCTGACGGCGAGCATGGACATGATTGGCTTCCCCAAGAATCTTCAGCAGCAAAGTGAAAGTAACAGCCTCGTTTGGAAAAGCTTTCTGGGTAATAAACCCACCCACCACAATCCGGGTCCTTCTTCTTCCAAGACGACCATGAATAATGAGTCTGGTTCCACCAATTTCTATCAGTACACCAAACCAGATTTCACATCCAACGATAATGATCTGATTGTAGGAGGAGCTCCAAATCATCATGATTCTTCGTCTACCGCTTGGCCAGATAACAGGTTACTTGTGGATGATTCTTCTTTAAGGTGTGTGTTCCCTTGCGAAGGAAACGAAAGGCCCAGTCAGGGCCTTTCGCTCTCTTTGAGCTCCAATAATCCCTTAAGCATTGGGTTACAATCTTTTGAACTAAGACAGACCAACAACCACCACCATCATCAGAACCAACCGGACTTTGTTTCTTCAACTAGTGGAGACAAGTTATTGTTGGGAAAATCAGTGAATCATCCTCATCATCATCAACAACAACAAGAAGCTGGTAATCTGTATCAAGGCCATTTTCTGCTTAAGAACTCCAAATATTTGGTTGCTGCACAGGAACTTCTCAACGAGTTTTGCAGTCTGGGAACGAAGCAAAGTGACATAGTGAAGCAAAAGTCGTCATCAAGTCAGAAAAACCAACAGTGGGAAGATGATAACGGAATCGGTCCCTCCAAGAAGCATCCCGTTGGCTCTCTAGAATTTATCGAATTACAGAAAAGAAAGACCAGACTACTCTCCATGCTTGAAGAGGTTGAGAGGAGATACAGGCACTACTGCAACCAAATGAAGGCGGTGGTGTCGTCGTTTGAGGCGGTGGCCGGGACCGGAGCTGCGAGGGTTTACTCGGCGTTGGCATTGAAGGCGATGTCGAGGCATTTCAGGTGTCTGAAAGATGGGATATTGAGTCAGATAGAAGTGGCAAGAAGAGGCATGGGAGAGAAAGATCCAGTTGCACCAGGAACAACAAGAGGTGAAACGCCAAGACTCAGAATCATAGACCAAGCTCTCAGACAACAGAGAGCTTTCCAACAAATGAGCATGATGGAGAGTCATCCATGGCGACCCCAAAGAGGCCTTCCCGAAAGATCCGTTTCAGTTCTTCGAGCTTGGCTTTTCGAGCATTTTCTTCATCCGTACCCAAGTGATATGGATAAACATATCTTAGCTCGCCAAACTGGTCTCTCAAGAAGCCAGGTGTCAAACTGGTTTATTAATGCAAGAGTGAGGCTGTGGAAGCCAATGGTGGAAGAGATGTACTTGGAGGAAACAAAAGAGCCTGAAAACAACATGGCCTCTTCTGAGGGGGTCACTGATCCCGCCGTGGACGACAACATCTTGACCTGCAGCCGGAACCTCGATAACCCACCTCCGACAACGCGTCTGGTAGATCAAAAGCCGCTCCAGAACCACCGGTTGCTTCGAATAGACTCCGAGTGTGTGTCTTCTATCATAAACAACAACCCAGATCACAAAAACGAATCCACCAAGAACAATAATCCGCAAGATCACCAGTGTGGTACATTTGGAGCTGGAGAGCTTGACTTTTCATCATACAACACTCACAACTCTGCAGCTCGCATGGTTTCTTACAGTAGTGAGAATGGGAATAATAGTAATCAGAACTATAACAGTGGAGGTGTTTCATTGACGCTAGGGTTACAGCAGCACGGAGGAAGTGGGGTGAGTCTGGCGTTTCCTCCGCCGTCTCAGGCGTCACTGTTCTATCCAAGAGATCAAATGGAAGATTGTCAACCTGTTCAGTACTCGCTTTTGGACGGTGAAGCTCAAAATCTTCCTTACAGAAATTTAATGGGTGCACAGTTGCTCCATGACTTGGCGGGATAG 2034 0.4705 MAGEMCDDKPREMVSSSAGFCYSEVSTGNPGIQSHMGNHQIQGFESDPDMFSLTASMDMIGFPKNLQQQSESNSLVWKSFLGNKPTHHNPGPSSSKTTMNNESGSTNFYQYTKPDFTSNDNDLIVGGAPNHHDSSSTAWPDNRLLVDDSSLRCVFPCEGNERPSQGLSLSLSSNNPLSIGLQSFELRQTNNHHHHQNQPDFVSSTSGDKLLLGKSVNHPHHHQQQQEAGNLYQGHFLLKNSKYLVAAQELLNEFCSLGTKQSDIVKQKSSSSQKNQQWEDDNGIGPSKKHPVGSLEFIELQKRKTRLLSMLEEVERRYRHYCNQMKAVVSSFEAVAGTGAARVYSALALKAMSRHFRCLKDGILSQIEVARRGMGEKDPVAPGTTRGETPRLRIIDQALRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDMDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEETKEPENNMASSEGVTDPAVDDNILTCSRNLDNPPPTTRLVDQKPLQNHRLLRIDSECVSSIINNNPDHKNESTKNNNPQDHQCGTFGAGELDFSSYNTHNSAARMVSYSSENGNNSNQNYNSGGVSLTLGLQQHGGSGVSLAFPPPSQASLFYPRDQMEDCQPVQYSLLDGEAQNLPYRNLMGAQLLHDLAG 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3571g00026 677 SUPERFAMILY Homeodomain-like 417 482 IPR009057 -
Pral3571g00026 677 MobiDBLite consensus disorder prediction 80 103 - -
Pral3571g00026 677 SMART prehox3 232 365 IPR006563 -
Pral3571g00026 677 MobiDBLite consensus disorder prediction 547 568 - -
Pral3571g00026 677 MobiDBLite consensus disorder prediction 547 573 - -
Pral3571g00026 677 Gene3D - 419 481 - -
Pral3571g00026 677 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 182 498 - -
Pral3571g00026 677 MobiDBLite consensus disorder prediction 265 282 - -
Pral3571g00026 677 SMART HOX_1 416 480 IPR001356 GO:0003677
Pral3571g00026 677 Pfam Associated with HOX 238 363 IPR006563 -
Pral3571g00026 677 MobiDBLite consensus disorder prediction 191 227 - -
Pral3571g00026 677 Coils Coil 297 317 - -
Pral3571g00026 677 ProSiteProfiles 'Homeobox' domain profile. 413 476 IPR001356 GO:0003677
Pral3571g00026 677 MobiDBLite consensus disorder prediction 195 211 - -
Pral3571g00026 677 MobiDBLite consensus disorder prediction 265 290 - -
Pral3571g00026 677 Pfam Homeobox KN domain 433 472 IPR008422 GO:0003677|GO:0006355
Pral3571g00026 677 CDD homeodomain 416 477 IPR001356 GO:0003677
Pral3571g00026 677 FunFam BEL1-like homeodomain protein 4 419 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3571g00026 Pral-Chr3571 1194534 1198733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3571g00026 142 676 Homeobox Transcription Factor Family AT5G41410 45.876 1.51e-138 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pral3571g00026 POX 7.2e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3571g00026 - - tcc:18606572 814.298