Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3564g00057 ATGTCTGGCTCTGCGATGTTGGGTGATGCGAGCTCGTGGTCTAGGGCGCTGGTGAATATCTCTCCTTATACGTTCTCCGCTGTTGGAATCGCCATATCTATCGGCGTCTCTGTCCTCGGTGCCGCCTGGGGGATTTATATTACTGGAAGTAGCTTGATCGGTGCCGCAATTAAGGCGCCCCGAATCACCTCCAAGAATCTTATAAGCGTGATCTTCTGTGAAGCTGTTGCTATTTATGGTGTTATCGTGGCTATCATTCTGCAAACCAAATTAGAGAGTGTTCCAAAGTCAAGTATATATGCACCTGAGTCTCTTAGAGCTGGATATGCAATTTTTGCCTCTGGAATAATCGTGGGCTTTGCAAATCTTGTTTGTGGGTTATGCGTTGGAATAATTGGAAGTAGCTGTGCATTGTCTGATGCTCAGAACTCCTCACTTTTTGTGAAAATTCTTGTGATTGAGATCTTTGGCAGTGCGCTTGGGCTATTTGGAGTTATTGTGGGAATTATTATGTCAGCTCAAGCAACATGGCCCTCGAAAGTTTAG 546 0.4524 MSGSAMLGDASSWSRALVNISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPKSSIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPSKV 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3564g00057 181 PRINTS Vacuolar ATP synthase 16kDa subunit signature 123 149 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pral3564g00057 181 PRINTS Vacuolar ATP synthase 16kDa subunit signature 150 173 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pral3564g00057 181 PRINTS Vacuolar ATP synthase 16kDa subunit signature 67 91 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pral3564g00057 181 PRINTS Vacuolar ATP synthase 16kDa subunit signature 41 65 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pral3564g00057 181 CDD ATP-synt_Vo_c_ATP6F_rpt2 107 171 - -
Pral3564g00057 181 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 10 175 - -
Pral3564g00057 181 Pfam ATP synthase subunit C 112 171 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pral3564g00057 181 Pfam ATP synthase subunit C 29 87 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pral3564g00057 181 SUPERFAMILY F1F0 ATP synthase subunit C 21 90 IPR035921 -
Pral3564g00057 181 SUPERFAMILY F1F0 ATP synthase subunit C 104 172 IPR035921 -
Pral3564g00057 181 CDD ATP-synt_Vo_c_ATP6F_rpt1 25 87 - -
Pral3564g00057 181 FunFam V-type proton ATPase proteolipid subunit 23 178 - -
Pral3564g00057 181 Gene3D - 23 177 IPR035921 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3564g00057 1 180 Primary Pumps ATPases(2) AT2G25610 90.556 1.26e-108 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3564g00057 K03661 - rcu:8284846 324.324