Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3564g00055 ATGAAAGCAATGGAGAGAAGCAAGGATGTGTTCTCAACGTTTGAACGTGAGGACGACGATGAAGCTCTGAAATGGGCAGCAATAGAGAGACTCCCGACATATTCGCGCATGAGGAAGAGTATCCTTGTTAACGCAGAAGGCAAAGCAAGTGAGGTAGATATCAAAAGGTTGAGTTTAACAGAGAGAAAGATTCTCTTAGAGAGACTCGTCGGGCTAGCAGAAGAAGATAATGAGAAGTTCTTGTTGAAACTTAAGGAACGGATTAATCGAGTTGGATTAGATATTCCAACAGTTGAAGTTAGGTTTGAGCATATAAATGTGGAGGCACAAGTCTACGTTGGAAGCAGAGCATTACCTTCATTGCTTAACTTTTATGGCAACGCATTAGAGGGGTTCTTAAATTATGTTCACGTTTTGCCAACTCCAAAGAAACCATTACATATTCTTCAGAATGTTAGCGGAATCATAAAGCCCAGGAGAATGGCGTTGCTCTTAGGACCCCCAGGTTCCGGAAAGACTACTTTGCTGTTGGCTCTGGCTGGAAAACTCGGTACCGATTTGAAACATTCTGGGAAAGTGACTTACAATGGGTACGGACTCGAAGAGTTTGTACCACAGAGGACATCAGCTTATATAAATCAGAATGATGTCCACATTGGAGAAATGACTGTGAGAGAAACACTGGACTTCTCAGCAAGATGTCAAGGAGTGGGGCACAATTATGAGATGTTGGCAGAACTGCTGAGAAGAGAAAAGGAAGCAAACATTAAACCAAATCCTGATGTTGATGCATACATGAAGGCAGCAGCACTAGAAGGACAAGAGACGAGCGTGGTCACTGACTACATTCTAAAGATTTTGGGACTAGAAGTGTGTGCTGACATTATGGTAGGGGATGAAATGATAAGAGGTATATCAGGGGGACAGAAAAAGCGTGTCACGACAGGGGAGATGCTCGTTGGGCCTGTGAGAGTGTTGCTCATGGATGAAATATCATCTGGTTTGGACAGTTCAACAACTTTTCAAATAATAAATTCAATGCGACAGTCCATCCATATTCTCAATGGAACTGCACTTATCTCTCTCCTACAACCTGCACCAGAAACTTATGAGCTATTTGATGATATCATACTTCTCACAGATGGCCAAATTGTGTACCAAGGCCCCAAAGAAAATGTGCTTGAGTTCTTTGAATCCATGGGCTTCAAGTGTCCTGAAAGAAAAGGAGTTGCTGACTTCTTACAAGAAGTGACATCAAGAAAAGATCAACGGCAGTACTGGGCACGTGAAGATGCACCTTACAGTTTTGTTACTGTGAAGGACTTTGTTGAAGCCTTCCAATCATTTCATATAGGGCAAAAAATTAAAGATGAGCTGGACAATCCTTTTGACAAATCTAAATGTCATCCAGCTGCCTTGACCACAAAGAAATATGGTGTTGGCAAGAAAGAGCTGTTGAGAGCTTGTTTTAGCAGAGAATTTTTGCTTATGAAGAGAAATTCCTTTGTCTACATATTCAAAGCCACTCAACTTACTTATTTAGCTGTCATGACTACAACATTATTTCTACGAACAAACATGCATCGGGATACTGTGGCGGATGGAGGAACATATATGGGTGCCCTGTTCTTTGCTGTCATTGTAGCTATGTTCAATGGAATATCGGAGTTAAACATGACCATCATGAAACTTCCCATCTTTTACAAGCAAAGAGACTGTATATTTTATCCTTCATGGGCTTATGCTCTACCACCATGGATACTCAAAATGCCAATAACCCTTGTAGAAGTAGCCATTTGGGAAGGCATCACTTATTACGGCATCGGTTTTGATCCAAGTGTTGGGAGGTTCTTCAAACAATACTTCCTTATTTTGTGCATTAATCAGATGGCATCTGCGCTATTTCGGTTGATGGCAGCATTAGGAAGGGATGTAATTGTTGCAAATACTGTTGGATCATTCGCTTTACTTATAGTTCTGGTTTTGGGTGGATTTGTGATTTCACGAGAGAATATACACAAATGGCTCCTTTGGGGTTATTGGTCGTCACCATTGATGTATGGGCAGAATGCTATTGCTGTGAACGAATTTCTCGGGCATAGTTGGAGAAAGGCTGTTCCCAAGTCCAATGAGGCATTGGGAGTTATGGTATTGAAATCTCGTGGGTTTTTCCCAGCAGCTTATTGGTATTGGATTGGAGCAGGGGCTTTGATTGGTCATACCTTTCTTTTTAATTTCCTTTTCACCTTGGCTTTGCAACATCTCAAACCATTCAAAAGAGCTCAACCAGGGCTGTCGAAAGAGAAATTGCTCGAGAGAAATGCTTCCAAAACTGGCGAGTTCATTGACCCTCCACAAGCAGAATTGAGTGCTTTTGATGACAAGTCAGAAACAAAGATCGAAGAAGTAGGTTTATCATGTGGACCATTTCCTGCACACAGTAGTCATAAGGGCATGGTGCTTCCTTTTCAACCTCTATCCCTCACCTTTGATGAGATCAGATATTCTGTCGACATGCCACAGGAAATGAAAAACCAAGGTGTTCTTGAGGATCGTCTTGAACTTTTAAGGGGTGTGAGTGGTGCTTTTAGGCCAGGAGTACTAACAGCTTTAATGGGAGTAAGCGGTTCTGGCAAAACTACTCTGATGGATGTTTTGGCTGGTAGGAAGACTAGTGGCTATATCGAAGGAAGTATCACAATTTCTGGGTATACTAAAAAGCAAGAAACTTTTGCTCGTATATCAGGGTATTGTGAACAATTCGATATTCACTCACCCTATGTTACAGTCTATGAGTCCCTATTGTTCTCTGCATGGCTTCGATTGTCCCCTGAAATCGATGATGCAACTAAAAAGATGTTCATAGAAGAAGTCATGGAGCTTGTGGAGCTTAACTCATTAAGGGAAGCACTAGTTGGGTTACCGGGTGAGACTGGACTTTCAACTGAACAACGCAAGAGGCTTACAATTGCAGTTGAACTTGTAGCCAACCCATCAATAATATTCATGGATGAGCCAACCTCGGGCCTTGATGCAAGAGCAGCAGCAATTGTTATGAGAACTGTGAGAAACACCGTGGACACAGGACGAACCGTAGTTTGCACCATTCACCAGCCAAGCATTGATATATTTGATGCCTTTGATGAGTTGCTGCTTCTGAAATTGGGAGGAGAGCAGATATATGCTGGTCCGTTAGGCCACCATTGTTCCCAGCTGATTCAGTACTTTGAGGCTATTCAAGGAGTTCCTATGATCAAAGATGGTTACAATCCAGCAACTTGGATGCTGGAAGTGACATCACCAGGGATAGAAGCAAACCTCAATGTTAACTTTACTATTGAATACAGAAACTCAGAACTCCACCGGAGAAATAAACAACTGATCCAAGAGCTTAGTACACCTCGTCAAGATTCAAAAGATCTCTACTTTGCAAGCCAATATTCGCAGCCTTTCTTTGCACAATGCGTAACTTGCCTATGGAAACAACATTTATCATATTGGCGCAACACGTCATATAGTGCAGTAAGACTACTATGTACAACAATTATAGCTTTGCTGTTTGGGATGATTTTTTGGGACGTTGGCTCGAAAAGGAGAAGGGCGCAGGATCTTTTCAATTCCATGGGTTCAATGTATGCTGCTGTTATTTCCATTGGAGTACAAAATGGCTGCTCAGTGCAACCCATAGTGGCCGTTGAGAGAACAGTCTTCTATAGAGAAAGAGCTGCTGGAATGTATTCAGCTTTGCCTTACGCTGTGGCGCAGGTTATTATTGAGCTTCCTCACATCTTGATCCAGACTCTAATATATGGGGTTATAGTGTATGCCATGATGGGATTTGAGTGGACATTAGCCAAGTTCTTGTGGTATCTCTTCTTCATGTACTTCACCTTTTCATACTTCACATTCTATGGCATGATGACCATGGCTATCTCTCCCAATCCCCACGTTGCGATGATATTCTCAAGTGCCTTCTATGCAATATGGAACCTTTTCTCAGGCTTTATCATTCCCTTATCGAGAATACCCGTGTGGTGGAAATGGTACTATTGGATTTGCCCTGTTGCTTGGACTTTGAATGGATTGATTACCTCCCAATACGGAGACCAAACGGAGAAACTAGAGTCAGGCCAAACAGTTGAAGACTTTGTGACAGGTTATTTCAGATTCAAATATGATTTCTTGGGAGTTGTGGCTGTTGTGGTAGCTTGTTTCTCAGTGCAGTTTGCGCTCATATTCGCCTTTGGAATCAAAGCATTTAACTTTCAAAAGCGATGA 4278 0.4205 MKAMERSKDVFSTFEREDDDEALKWAAIERLPTYSRMRKSILVNAEGKASEVDIKRLSLTERKILLERLVGLAEEDNEKFLLKLKERINRVGLDIPTVEVRFEHINVEAQVYVGSRALPSLLNFYGNALEGFLNYVHVLPTPKKPLHILQNVSGIIKPRRMALLLGPPGSGKTTLLLALAGKLGTDLKHSGKVTYNGYGLEEFVPQRTSAYINQNDVHIGEMTVRETLDFSARCQGVGHNYEMLAELLRREKEANIKPNPDVDAYMKAAALEGQETSVVTDYILKILGLEVCADIMVGDEMIRGISGGQKKRVTTGEMLVGPVRVLLMDEISSGLDSSTTFQIINSMRQSIHILNGTALISLLQPAPETYELFDDIILLTDGQIVYQGPKENVLEFFESMGFKCPERKGVADFLQEVTSRKDQRQYWAREDAPYSFVTVKDFVEAFQSFHIGQKIKDELDNPFDKSKCHPAALTTKKYGVGKKELLRACFSREFLLMKRNSFVYIFKATQLTYLAVMTTTLFLRTNMHRDTVADGGTYMGALFFAVIVAMFNGISELNMTIMKLPIFYKQRDCIFYPSWAYALPPWILKMPITLVEVAIWEGITYYGIGFDPSVGRFFKQYFLILCINQMASALFRLMAALGRDVIVANTVGSFALLIVLVLGGFVISRENIHKWLLWGYWSSPLMYGQNAIAVNEFLGHSWRKAVPKSNEALGVMVLKSRGFFPAAYWYWIGAGALIGHTFLFNFLFTLALQHLKPFKRAQPGLSKEKLLERNASKTGEFIDPPQAELSAFDDKSETKIEEVGLSCGPFPAHSSHKGMVLPFQPLSLTFDEIRYSVDMPQEMKNQGVLEDRLELLRGVSGAFRPGVLTALMGVSGSGKTTLMDVLAGRKTSGYIEGSITISGYTKKQETFARISGYCEQFDIHSPYVTVYESLLFSAWLRLSPEIDDATKKMFIEEVMELVELNSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPLGHHCSQLIQYFEAIQGVPMIKDGYNPATWMLEVTSPGIEANLNVNFTIEYRNSELHRRNKQLIQELSTPRQDSKDLYFASQYSQPFFAQCVTCLWKQHLSYWRNTSYSAVRLLCTTIIALLFGMIFWDVGSKRRRAQDLFNSMGSMYAAVISIGVQNGCSVQPIVAVERTVFYRERAAGMYSALPYAVAQVIIELPHILIQTLIYGVIVYAMMGFEWTLAKFLWYLFFMYFTFSYFTFYGMMTMAISPNPHVAMIFSSAFYAIWNLFSGFIIPLSRIPVWWKWYYWICPVAWTLNGLITSQYGDQTEKLESGQTVEDFVTGYFRFKYDFLGVVAVVVACFSVQFALIFAFGIKAFNFQKR 1425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3564g00055 1425 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 8 1425 - -
Pral3564g00055 1425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 406 IPR027417 -
Pral3564g00055 1425 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 133 406 IPR003439 GO:0005524
Pral3564g00055 1425 CDD ABCG_PDR_domain2 825 1063 IPR034003 -
Pral3564g00055 1425 Gene3D - 136 439 IPR027417 -
Pral3564g00055 1425 SMART AAA_5 158 383 IPR003593 GO:0016887
Pral3564g00055 1425 SMART AAA_5 865 1057 IPR003593 GO:0016887
Pral3564g00055 1425 FunFam ABC transporter G family member 34 136 440 - -
Pral3564g00055 1425 FunFam ABC transporter G family member 40 842 1072 - -
Pral3564g00055 1425 Pfam ABC-transporter N-terminal 73 124 IPR029481 -
Pral3564g00055 1425 Pfam ABC transporter 149 331 IPR003439 GO:0005524
Pral3564g00055 1425 Pfam Plant PDR ABC transporter associated 702 762 IPR013581 -
Pral3564g00055 1425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 845 1066 IPR027417 -
Pral3564g00055 1425 Gene3D - 842 1079 IPR027417 -
Pral3564g00055 1425 Pfam ABC transporter 856 1008 IPR003439 GO:0005524
Pral3564g00055 1425 Pfam ABC-2 type transporter 364 416 IPR043926 GO:0140359
Pral3564g00055 1425 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 828 1080 IPR003439 GO:0005524
Pral3564g00055 1425 Pfam ABC-2 type transporter 1154 1366 IPR013525 GO:0016020|GO:0140359
Pral3564g00055 1425 Pfam ABC-2 type transporter 485 697 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3564g00055 Pral-Chr3564 273695 280890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3564g00055 866 1106 Calmodulin-binding Proteins AT2G36910 23.643 7.67e-06 48.9