Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3564g00051 ATGGCTCAGCATAACAATGGCAACAACAGTGCGAGCCAACAGTTAGTGAAGCCTGTCTTCCATGATTTTCTGGGCTCGAAGCCCCATGATTCCCTTGTCGTTTTGGCCCCCAAAACCGCCAACGTGAGGCTGTCCGAGGCCTCGCCGTCCTCCACATCGGTGTCTGTTGCCGCCTCTTCTGCCGGTGGCCGTGGTCCCTTCTCAACCACATCCGACATCGGCTCTGAAAGACAGGTAGGAAATCATCTCGAGGGAGTTCCATTTTATGGACCCAGGAGTGATTTTTCTGACACTGGGTTGAGCAACAGGCTAATAGGAAACAAGAGAAGTAGTTCCGAGTCCGCTTTCATGGGATCCTCCAGAGATGCCTTCCAAGTGGTCCCTGACTCCATTCAAAACTCACATTTGATGAAAATGTTCCGGAGTACAGCGGGAGGAGAGCTTCACAGAAGGTCTAATGATGATGAAGTTTTTCTTGGCATGCAGTCACTGAAGCCAACGTCAGCTTCTCAGATATTTCAGCCTCTTGCTGGAACTAAGTTTGATTCCAATAGATGGGAACGGTCTGTTGTTATGAATGCTGGCCCGTCTATGCAGCATCCACCACGTGGGGCTCAATTAACACCTTTTGCACACCAAATAGCTTCAAACAAGGTCAGGGAGACCAATATTGGTCCTTCATTTATCTCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATGAAAGGCCCTGGAATTTTGAGCTCTATAAACATCACAACTGCTGCGCCTGAGAAAACTCCTTCTGCTGTGGTGCTTGGTGGAGGCAGGCCAAAGCCTGTGATGAATATAATAGATTTAGAATCATCCACTCCTCCGAGCCAACATGAGTCAAGATCTGCCAGCTGCCAGATGACCATATTCTATGGAGGTCAAGCTCATGTGTTTGATAATGTCCACCCGAATAAGGCAGATGTTATAATGAGCTTAGCAGGGTCAAATGGAGGAAGTTGGTCCACAAGCACATGCTCGTCCAAGCCTCCTGTGAAACAGCTGGTTCATGATACTGCAGAAACTCAAACTGGGAAGCTTCATGCCATTCCCTCTGCTGATCGCTTCACTACTGCACCACCAGCACCAGCACCAGGGCGACCTCAAGCAAGTGTTGCTGCTAAAGAAGATACGAGAAAAAACCCAGTTGAAGTACCGGAGCTAGATCCCATTTCGCAAGAGAAGAGAGCCGAATGA 1230 0.4878 MAQHNNGNNSASQQLVKPVFHDFLGSKPHDSLVVLAPKTANVRLSEASPSSTSVSVAASSAGGRGPFSTTSDIGSERQVGNHLEGVPFYGPRSDFSDTGLSNRLIGNKRSSSESAFMGSSRDAFQVVPDSIQNSHLMKMFRSTAGGELHRRSNDDEVFLGMQSLKPTSASQIFQPLAGTKFDSNRWERSVVMNAGPSMQHPPRGAQLTPFAHQIASNKVRETNIGPSFISQSAADEGSRTGMKGPGILSSINITTAAPEKTPSAVVLGGGRPKPVMNIIDLESSTPPSQHESRSASCQMTIFYGGQAHVFDNVHPNKADVIMSLAGSNGGSWSTSTCSSKPPVKQLVHDTAETQTGKLHAIPSADRFTTAPPAPAPGRPQASVAAKEDTRKNPVEVPELDPISQEKRAE 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3564g00051 409 MobiDBLite consensus disorder prediction 357 409 - -
Pral3564g00051 409 SMART tify_2 292 327 IPR010399 -
Pral3564g00051 409 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 101 384 IPR040390 -
Pral3564g00051 409 MobiDBLite consensus disorder prediction 44 75 - -
Pral3564g00051 409 MobiDBLite consensus disorder prediction 384 409 - -
Pral3564g00051 409 Pfam tify domain 295 326 IPR010399 -
Pral3564g00051 409 ProSiteProfiles Tify domain profile. 292 327 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3564g00051 Pral-Chr3564 235922 241638 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3564g00051 1 325 Tify Gene Family AT4G32570 38.938 2.67e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral3564g00051 tify 1.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3564g00051 - - pcin:129294719 668.307