Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3564g00046 ATGGAATCACATAAAAAGTATACCATCTATAAATACACCTTGACTTCTGAACTTAGTCAAAGCAAATGCTGCTTCTTCCGCTCCGCACGGAGAGAGAGAGACGGAAGCAGCAATGGAGGGCGAGAAGGCCGCGCTACAGTCGTGCTGGTAATGGCTCAGCATAACAATGGCAACAACAGTGCGAGCCAACAGTTAGTGAAGCCTGTCTTCCATGATTTTCTGGGCTCGAAGCCCCATGATTCCCTTGTCGTTTTGGCCCCCAAAACCGCCAACGTGAGGCTGTCCGAGGCCTCGCCGTCCTCCACATCGGTGTCTGTTGCCGCCTCTTCTGCCGGTGGCCGTGGTCCCTTCTCAACCACATCCGACATCGGCTCTGAAAGACAGGTAGGAAATCATCTCGAGGGAGTTCCATTTTATGGACCCAGGAGTGATTTTTCTGACACTGGGTTGAGCAACAGGCTAATAGGAAACAAGAGAAGTAGTTCCGAGTCCGCTTTCATGGGATCCTCCAGAGATGCCTTCCAAGTGGTCCCTGACTCCATTCAAAACTCACATTTGATGAAAATGTTCCGGAGTACAGCGGGAGGAGAGCTTCACAGAAGGTCTAATGATGATGAAGTTTTTCTTGGCATGCAGTCACTGAAGCCAACGTCAGCTTCTCAGATATTTCAGCCTCTTGCTGGAACTAAGTTTGATTCCAATAGATGGGAACGGTCTGTTGTTATGAATGCTGGCCCGTCTATGCAGCATCCACCACGTGGGGCTCAATTAACACCTTTTGCACACCAAATAGCTTCAAACAAGGTCAGGGAGACCAATATTGGTCCTTCATTTATCTCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATGAAAGGCCCTGGAATTTTGAGCTCTATAAACATCACAACTGCTGCGCCTGAGAAAACTCCTTCTGCTGTGGTGCTTGGTGGAGGCAGGCCAAAGCCTGTGATGAATATAATAGATTTAGAATCATCCACTCCTCCGAGCCAACATGAGTCAAGATCTGCCAGCTGCCAGATGACCATATTCTATGGAGGTCAAGCTCATGTGTTTGATAATGTCCACCCGAATAAGGCAGATGTTATAATGAGCTTAGCAGGGTCAAATGGAGGAAGTTGGTCCACAAGCACATGCTCGTCCAAGCCTCCTGTGAAACAGCTGGTTCATGATACTGCAGAAACTCAAACTGGGAAGCTTCATGCCATTCCCTCTGCTGATCGCTTCACTACTGCACCACCAGCACCAGCACCAGGGCGACCTCAAGCAAGTGTTGCTGCTAAAGAAGATACGAGAAAAAACCCAGTTGAAGTACCGGAGCTAGATCCCATTTCGCAAGAGAAGAGAGCCGAATGA 1380 0.487 MESHKKYTIYKYTLTSELSQSKCCFFRSARRERDGSSNGGREGRATVVLVMAQHNNGNNSASQQLVKPVFHDFLGSKPHDSLVVLAPKTANVRLSEASPSSTSVSVAASSAGGRGPFSTTSDIGSERQVGNHLEGVPFYGPRSDFSDTGLSNRLIGNKRSSSESAFMGSSRDAFQVVPDSIQNSHLMKMFRSTAGGELHRRSNDDEVFLGMQSLKPTSASQIFQPLAGTKFDSNRWERSVVMNAGPSMQHPPRGAQLTPFAHQIASNKVRETNIGPSFISQSAADEGSRTGMKGPGILSSINITTAAPEKTPSAVVLGGGRPKPVMNIIDLESSTPPSQHESRSASCQMTIFYGGQAHVFDNVHPNKADVIMSLAGSNGGSWSTSTCSSKPPVKQLVHDTAETQTGKLHAIPSADRFTTAPPAPAPGRPQASVAAKEDTRKNPVEVPELDPISQEKRAE 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3564g00046 459 ProSiteProfiles Tify domain profile. 342 377 IPR010399 -
Pral3564g00046 459 MobiDBLite consensus disorder prediction 407 459 - -
Pral3564g00046 459 MobiDBLite consensus disorder prediction 94 125 - -
Pral3564g00046 459 Pfam tify domain 345 376 IPR010399 -
Pral3564g00046 459 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 151 433 IPR040390 -
Pral3564g00046 459 MobiDBLite consensus disorder prediction 434 459 - -
Pral3564g00046 459 SMART tify_2 342 377 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3564g00046 Pral-Chr3564 216001 241638 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3564g00046 50 375 Tify Gene Family AT4G32570 38.824 3.56e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral3564g00046 tify 1.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3564g00046 - - pcin:129294719 668.307