Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral3564g00044 | ATGAACGTTCCCTCACCAAAACTATATCCTGAAGGTTTATACGACACTTGCCCATTGTTGATGGAGCATTCTGGGCCCTTGAACTGCAGTCAGGTCACTATCGACGTAGCTGGGAGTAGTGAAGCTTCCACATCTACCTCTCCGCATGATAGACATTTTAACAGCGGAGGTACATCACAACATGAAGACAGACCTAGTAGTGCAAGATTACCGGCTTCTCTGCCTTCAGTTTCTATTGCATCTAATGGTACAAATCCTAGGAATTCTTCAGTTGTAAGACGAGGGGAGACCCGTCGGAACAGGAGTCCATTGAATTCAGGGTTATGGATATCTATTGAGCTAGTCCTCACAGTAAGCCAGATTGTTGCATCTATTATTGTTTTGTCTTTGTCGAGGCATGAGCATCCACGCACTCCCCTGTTTGCATGGATTATTGGTTATGCGTGTGGATGTGTTGCTACTATCCCCTTGCTTGGTTGGAGGTATTATCATCATAACCAGGGTAGAGAGCTAAATTCATCTCAACCACGTCAAGCTTCCCCTCGAGTTAATGTTTCTTCAAGGACACTTCTTTCTGTTTCAAGAACTAATGGGGAAGAAGACGATCAGGCCGTTGTTTCATCCTCTAGAAGCAGTCAACATCCAGTCATGATGAATCCAAGACTGAAGTCACTAGTGGAATATTTCAAAATGGCCTTAGATTGCTTTTTTGCTGTATGGTTCGTTGTTGGCAATGTGTGGATCTTTGGGGGGAACTCCTCTGCTACTGATGCTCCTAATATGTATAGGTTATGTATTGTGTTTCTGACATTCAGCTGCATTGGCTATGCTATGCCCTTCATTTTATGTGCAACAATCTGCTGTTGTCTGCCTTGTATAATTTCCATCCTTGGGGTTAGAGAGGATCTGACACAGACAAGGGGGGCAACATCTGAATCTATTAATTCCTTGCCAGTATACAAGTTCAAGGTGAAGAAACGTAAAAAAGGTGATGAAAGCAACTCAAATGCTTTAGAAGGTGGGATTGTGGCTGCTGGAACTGAAAAGGAGCGTGTGATCTCTGGAGAAGATGCAGTTTGCTGCATCTGCCTGGCAAAGTATGAAAATAACGATGAGCTGAGAGAGTTGCCATGTTCCCATCTTTTTCACAAAGACTGTGTAGACAAGTGGCTGAAGATTAATGCATTATGCCCTCTCTGCAAAAGTGAGGTTGGTGGGAACCCAATAGGACCAGTCTCCGGCGAAGGTTCCAACCAACAAAGGGGTGAGAACCGAGTTGGAGTTAGCCCAATCAATAGCATAGTATAA | 1308 | 0.4404 | MNVPSPKLYPEGLYDTCPLLMEHSGPLNCSQVTIDVAGSSEASTSTSPHDRHFNSGGTSQHEDRPSSARLPASLPSVSIASNGTNPRNSSVVRRGETRRNRSPLNSGLWISIELVLTVSQIVASIIVLSLSRHEHPRTPLFAWIIGYACGCVATIPLLGWRYYHHNQGRELNSSQPRQASPRVNVSSRTLLSVSRTNGEEDDQAVVSSSRSSQHPVMMNPRLKSLVEYFKMALDCFFAVWFVVGNVWIFGGNSSATDAPNMYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGVREDLTQTRGATSESINSLPVYKFKVKKRKKGDESNSNALEGGIVAAGTEKERVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSEVGGNPIGPVSGEGSNQQRGENRVGVSPINSIV | 435 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral3564g00044 | 435 | MobiDBLite | consensus disorder prediction | 39 | 102 | - | - | |
Pral3564g00044 | 435 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 341 | 406 | IPR013083 | - | |
Pral3564g00044 | 435 | MobiDBLite | consensus disorder prediction | 412 | 435 | - | - | |
Pral3564g00044 | 435 | FunFam | E3 ubiquitin-protein ligase | 343 | 408 | - | - | |
Pral3564g00044 | 435 | PANTHER | C3H4 TYPE ZINC FINGER PROTEIN | 29 | 404 | - | - | |
Pral3564g00044 | 435 | SMART | ring_2 | 360 | 400 | IPR001841 | - | |
Pral3564g00044 | 435 | MobiDBLite | consensus disorder prediction | 39 | 91 | - | - | |
Pral3564g00044 | 435 | MobiDBLite | consensus disorder prediction | 195 | 215 | - | - | |
Pral3564g00044 | 435 | Pfam | Ring finger domain | 360 | 401 | IPR001841 | - | |
Pral3564g00044 | 435 | ProSiteProfiles | Zinc finger RING-type profile. | 360 | 401 | IPR001841 | - | |
Pral3564g00044 | 435 | MobiDBLite | consensus disorder prediction | 411 | 435 | - | - | |
Pral3564g00044 | 435 | SUPERFAMILY | RING/U-box | 352 | 404 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral3564g00044 | Pral-Chr3564 | 212676 | 216013 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral3564g00044 | 13 | 405 | C3H Transcription Factor Family | AT1G80400 | 52.323 | 2.94e-144 | 416 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral3564g00044 | - | - | gmx:100778728 | 617.076 |