Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3563g00051 ATGAAACTCAAAAAAGACAAGCCACTGGGGCTTTCCTGTTCCAACAGGGAAAAACCGTTGCCAAGATACAAGTTAAAGGCAACGATACACCCGGAAGGCCAAATCGGGATTGATGATAACAACAGAGTCAAACGGAAAGCTCCTTCACCTGCAAAATATATGGTGTTCCCAGAAAATCATGATCAGAGGAAGAAGAAGATGATGATGGTTTTTGATCCTGGAAGTGACGCATATTTGCAGTGGAACCGAGTATTCCTGGGTTCTTGCATACTGGCACTCTTTATTGATCCTCTGTTTTTCTATGTGCCCAAAGCGGAAAATGATGGACACTCATCATGTATGACTACTGATTCGAGTTTGGCAATTGTTCTGACGTGTTTCCGTACGTTGGCTGATATTTCCTATCTGCTCAACATGCTCATCAAGTTCAGAACAGCCTACGTAGACCCAAATTCAAGGATTTTTGGCAGAGGTGAGTTAGTTATGGATCAATGGTTGATTGCCAAGCGGTATTTGAGATCAGAATTCATCATAGATCTTTTAGCCACACTCCCCTTCCTCAGAAAGAGATGTGAAATGACAATGCTGGCGTTTCTTCTTCAATGGCAGATCCTGATTTGGCTTATAATGCCTGCAGTTAAAAGCCCCCGCGCAGACCACTCCAGCAATTCTCTTGTACTGATCATTCTGCTTCAATATTTCCCCAGATTATACTTGATTTTCCCATTAAGTTCTCAGATCGTCAAAGCGGCTGGGGTAGTTACAAAGACAGCTTGGGCCGGAGCAGCTTATAATCTTTTACTTTACATGTTGGCTAGCCATGTTTTGGGAGCATTATGGTATTTGTTTTCGTTTGAAAGGAATGCTACTTGCTGGAAATCTGAATGCAAAAATGAAACTCAATGTATCCTTAAGTACTTGGATTGCAGAACTTCAAACAATGATGATCGCTTAAAGTGGATAAACTCTACTTCTGTGTTTGCTAACTGCAATCCATCAAACAGCGACAGTTTCGAGTTCGGCATTTTTGAACCAGCGGTTCACTATAATGTCAGTTCCATAGAGTTTGTTCATAAGTACGTCTATTGTCTGTGGTGGGGCTTGCAGAATCTGAGCTGCTGTGGCCAGGAATTGATTACGAGCAAGTTCATTGGGGAAACTACATTTTCAATACTCGTATGTATCCTAGGTTTAGTTTTGTTTGCCCATTTGATTGGAAACATGCAGACATATTTGCAATCTATTACTGTGAGAGTGGAGGAATGGAGACTCAAGCGACATGATACTGAAGAGTGGATGAAACACCGCCAACTTCCACAACATTTGAGAGGACGTGTTCGAAGATTTCTTCAATACAAATGGCTTGCAACTCAAGGAACCGATGAGGAATCTATCTTGCGAGGCCTTCCCAAAGACCTGCGTAGAGATATTCAATGTTACCTTTGCTTAGATCTTATTCGACGTGTCCCCTTTTTCTCACAAATGGATGATCAGCTACTGGATGCAATATGTGAGAGATCGGTATTGTTCTTGAGTCCTCAAGGAACTTATGTTGTACGGGAAGGAGATCCAGTGACAGAGATGCTTTTCATAATAAGAGGAAGACTTGAAAGCTCAACCACAAATGGAGGCAGGACAGGCTTCTTCAACTCTATTGTATTGAAACCAGGTGATTTCTGTGGAGGAGAATTACTATCATGGGCGTTGCTTCCCACATCAACATCCACTCTCAATTTGCCTTCTTCTACAAGAACAGTGAAAGCCCTTGTGGAAGTAGAGGCCTTTGCACTGAGAGCAGAAGATCTCAAGTTCGTGGCCAATCAGTTTCGTCGTTTTCACAGCAAGAAACTGCAACATACCTTCCGTTTCTACTCGTACCATTGGAGGACTTGGGCAGCCTGCTTCATTCAGGCTTCTTGGAGAAGGTACAAGAATAGAATGCTGGCAATGAGTTTGAGCGGAGATCAGCCATTTGATGATTTTGATGGAATGGGACATAGCCAGCAAATGCTCACTGCTGTGACTTCAAGTAATACTTCACCGAGCGACCCTGTAGACATATCAGGATTTGGCACAAAATCAAGAAGAGAAGCTCTGAGGATAACGGATATTAAGATGCCTAAGTTACAAAAGCCTAAAGAGCCAGACTTCTCAAAGGAAGCAGAGGACATTTAG 2175 0.4257 MKLKKDKPLGLSCSNREKPLPRYKLKATIHPEGQIGIDDNNRVKRKAPSPAKYMVFPENHDQRKKKMMMVFDPGSDAYLQWNRVFLGSCILALFIDPLFFYVPKAENDGHSSCMTTDSSLAIVLTCFRTLADISYLLNMLIKFRTAYVDPNSRIFGRGELVMDQWLIAKRYLRSEFIIDLLATLPFLRKRCEMTMLAFLLQWQILIWLIMPAVKSPRADHSSNSLVLIILLQYFPRLYLIFPLSSQIVKAAGVVTKTAWAGAAYNLLLYMLASHVLGALWYLFSFERNATCWKSECKNETQCILKYLDCRTSNNDDRLKWINSTSVFANCNPSNSDSFEFGIFEPAVHYNVSSIEFVHKYVYCLWWGLQNLSCCGQELITSKFIGETTFSILVCILGLVLFAHLIGNMQTYLQSITVRVEEWRLKRHDTEEWMKHRQLPQHLRGRVRRFLQYKWLATQGTDEESILRGLPKDLRRDIQCYLCLDLIRRVPFFSQMDDQLLDAICERSVLFLSPQGTYVVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSIVLKPGDFCGGELLSWALLPTSTSTLNLPSSTRTVKALVEVEAFALRAEDLKFVANQFRRFHSKKLQHTFRFYSYHWRTWAACFIQASWRRYKNRMLAMSLSGDQPFDDFDGMGHSQQMLTAVTSSNTSPSDPVDISGFGTKSRREALRITDIKMPKLQKPKEPDFSKEAEDI 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3563g00051 724 Gene3D - 109 415 - -
Pral3563g00051 724 Gene3D Helix hairpin bin 416 482 - -
Pral3563g00051 724 PRINTS EAG/ELK/ERG potassium channel family signature 454 461 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3563g00051 724 PRINTS EAG/ELK/ERG potassium channel family signature 271 281 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3563g00051 724 PRINTS EAG/ELK/ERG potassium channel family signature 386 397 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3563g00051 724 PRINTS EAG/ELK/ERG potassium channel family signature 404 413 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3563g00051 724 PRINTS EAG/ELK/ERG potassium channel family signature 139 148 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3563g00051 724 PRINTS EAG/ELK/ERG potassium channel family signature 360 377 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3563g00051 724 CDD CAP_ED 491 624 IPR000595 -
Pral3563g00051 724 Pfam Cyclic nucleotide-binding domain 513 603 IPR000595 -
Pral3563g00051 724 SUPERFAMILY Voltage-gated potassium channels 73 413 - -
Pral3563g00051 724 SUPERFAMILY cAMP-binding domain-like 421 616 IPR018490 -
Pral3563g00051 724 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 59 717 - -
Pral3563g00051 724 Pfam Ion transport protein 81 419 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral3563g00051 724 Gene3D Jelly Rolls 489 611 IPR014710 -
Pral3563g00051 724 SMART cnmp_10 491 624 IPR000595 -
Pral3563g00051 724 ProSiteProfiles cAMP/cGMP binding motif profile. 498 561 IPR000595 -
Pral3563g00051 724 MobiDBLite consensus disorder prediction 703 724 - -
Pral3563g00051 724 FunFam Cyclic nucleotide-gated ion channel 1 489 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3563g00051 Pral-Chr3563 182055 185519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3563g00051 17 718 Ion Channels AT2G24610 60.443 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3563g00051 K05391 - gmx:100803334 966.066