Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3563g00050 ATGAAGAATCTGAAGGATCATTCAGAGAAGCATGAGAAAAAGAGTGCGAATGGAATAGTGGCAGTGGGAATAGACAAAGACAAGGGGAGTCAATATGCACTCAAATGGGCAACTGAACATCTCCTCGCGAGAGGCTCAACCCTAGTTCTCATCCATGTCAATGTTAGGTTAAATCAAGCTTCATGGTCATGGAATAGTAACGTGGACAAGGGATCATTGCCAAACAAAAACTCTGATAGTCACACTGAGGAAATTTTTCATCCATGCCATGTCTTTTGTGCACGGAAAGGCATACATTGCAAGGATGTCATACTAGAAGATACAGATGTAGCGAGAGCTTTGATTGAATATGCTTTTCGCACAGCTACTGAGCATTTAGTTATTGGCTCTTCAAGTAGAACTGGCTTATTCAGAAGATTCAAGTTAGTTGATATTCCAGGAACGGTGACAAAAGGAGCACCGGATTTCTGTTCTGTCTATGTTGTTGCGAAAGAAAAGATTCAAACAATGCGATCAGCTTCTCGTCCTGCTCCAGCCACTTACCTTCCCAGCAAGCATATTCAAGGAAGCATCAAGCCGAAACTAGCAGAGACAAATATGCCATTAAATAATCATGCACATGAAAAACGATCCACTGGTGGACAAAGTACATTAAAGGATGAAACTGAATCCTTCAGGTCACCATTAACCAGGAAAAATTTGGATGGCAAGTCACATGGGGAAAATTCCCTTCCAGGAATGTCGAATAGCTCAGAGATAGACGGGAACTATAGCTTTGAGTCATTGCAGCATCAAAAGGGGTCAATGGATATTAGCTCTCATCTGGAATCCTTCTCATCAGATGGTGATGGACTTTTAACGTCACATGGCACGGACGATATAGAGGCTGAAATGAGGAGACTAAAATTGGAGCTTAAGAGAACAATGGAAATGTATAGCACCGCCTGTAAAGAAGCACTCGTGGCACAGCAGAAGACAATAGAGCTCCAACGTTGGAAAAGGGAGGAAGAAAGGAGATTGGAAGAGGCAAGGCTTGCTGGGGAAGCTGCATCTGTGGTTGCAGAAAAGGAGATGGCCAGAAGTAAAGCAGCCAAGGAGGCTGCTGAAGCACAAAAGAGGATTGCAGAACTGGAAGCACAAAGGAGGGTTGTTGCAGAAGGGAAAGCAGTGAAAGAATCAGAGGAGAAAACAAAAGCACTTGGTGCTTTAACAAACATAGACATCAGTTATAGAAAGTATTCAATCGAGGAGATTGAAGCTGCAACGGAGCTCTTTGCAGATTCTTTAAAGATTGGAGAAGGGGGTTATGGTCCTGTATATAGGTGCCATTTAGACCATACCCCTGTAGCAGTAAAGGTTCTACGTTCTGATGCAACACAAGGGAGGTCACAGTTTCAACGAGAGGTTGAGGTACTGAGCTGCATAAGGCATCCAAACATGGTTCTCCTCCTGGGAGCATGTCCAGAGTATGGCTGCCTTGTCTATGATTTCATGGCCAACGGAAGCTTAGAAGATCGCCTCTTTCGTCGAGGAAAAACTCCCTCTCTTCCTTGGCAGCTTAGGTTCAAAATTGCAGCCGAAATATGCACTGGCTTGTTGTTTCTGCACCAGAGAAAACCAGAGCCTCTGGTGCATAGGGACTTGAAACCAGCTAACATCCTGCTTGACAGCAACTATGTGGCCAAGATCAGTGATGTAGGCTTAGCCAAACTAATTCCACCATCTTTGGCTGACAGTGTGACACAATATCAAATGACGTCTGCTGCTGGAACTTTCTGCTATATAGATCCAGAGTACCAACAGACAGGAATGCTTGGGGTGAAATCTGATATATACTCCCTTGGGATCATTTTCCTGCAGATTTTAACAGCTAGGCCACCCATGGGTTTGACTCATCAGGTTGAGAGAGCTATTGAGAAAGGGGCATTTGCTCAGATACTGGATCCAACAGTGCCTGACTGGCCTGTAGAAGAGGCCTTGAGCCTAGCAAGTATGGCACTTAAGTGTTCCCAATTAAGGCGAAAAGATAGACCTGATCTCGCCAAGGTTGTCTTACCTGAACTGGGCAGATTGAAAAATCTTGCTTAA 2088 0.443 MKNLKDHSEKHEKKSANGIVAVGIDKDKGSQYALKWATEHLLARGSTLVLIHVNVRLNQASWSWNSNVDKGSLPNKNSDSHTEEIFHPCHVFCARKGIHCKDVILEDTDVARALIEYAFRTATEHLVIGSSSRTGLFRRFKLVDIPGTVTKGAPDFCSVYVVAKEKIQTMRSASRPAPATYLPSKHIQGSIKPKLAETNMPLNNHAHEKRSTGGQSTLKDETESFRSPLTRKNLDGKSHGENSLPGMSNSSEIDGNYSFESLQHQKGSMDISSHLESFSSDGDGLLTSHGTDDIEAEMRRLKLELKRTMEMYSTACKEALVAQQKTIELQRWKREEERRLEEARLAGEAASVVAEKEMARSKAAKEAAEAQKRIAELEAQRRVVAEGKAVKESEEKTKALGALTNIDISYRKYSIEEIEAATELFADSLKIGEGGYGPVYRCHLDHTPVAVKVLRSDATQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYDFMANGSLEDRLFRRGKTPSLPWQLRFKIAAEICTGLLFLHQRKPEPLVHRDLKPANILLDSNYVAKISDVGLAKLIPPSLADSVTQYQMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHQVERAIEKGAFAQILDPTVPDWPVEEALSLASMALKCSQLRRKDRPDLAKVVLPELGRLKNLA 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3563g00050 695 FunFam U-box domain-containing protein 51 498 695 - -
Pral3563g00050 695 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 398 497 - -
Pral3563g00050 695 Coils Coil 351 387 - -
Pral3563g00050 695 MobiDBLite consensus disorder prediction 205 223 - -
Pral3563g00050 695 Gene3D Phosphorylase Kinase; domain 1 404 497 - -
Pral3563g00050 695 ProSiteProfiles Protein kinase domain profile. 425 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3563g00050 695 Coils Coil 291 311 - -
Pral3563g00050 695 SMART serkin_6 425 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3563g00050 695 MobiDBLite consensus disorder prediction 204 251 - -
Pral3563g00050 695 CDD STK_N 19 164 - -
Pral3563g00050 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Pral3563g00050 695 Gene3D HUPs 3 162 IPR014729 -
Pral3563g00050 695 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 140 - -
Pral3563g00050 695 MobiDBLite consensus disorder prediction 224 238 - -
Pral3563g00050 695 Pfam Universal stress protein family 20 139 IPR006016 -
Pral3563g00050 695 PANTHER OS02G0152300 PROTEIN 20 694 - -
Pral3563g00050 695 SUPERFAMILY Protein kinase-like (PK-like) 405 684 IPR011009 -
Pral3563g00050 695 Gene3D Transferase(Phosphotransferase) domain 1 498 694 - -
Pral3563g00050 695 Pfam Protein kinase domain 428 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3563g00050 Pral-Chr3563 177498 181779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3563g00050 12 695 Receptor kinase-like Gene Family AT1G78940 53.288 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pral3563g00050 Pkinase 2.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3563g00050 - - pcin:129294308 1102.04