Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3563g00038 ATGGATCCAAAGAAATCTAACAAGATCAGAGATATTGTTAGGCTTCAACAGATCCTCAAGAAATGGAGAAAGCAAGCCAACTCTCCCAAAACCAGTGACAGTAACAACAGCGGCAGTAGCAATAAAAGTATCAAGTTTCTGAAGAGGACACTTTCTATATCTGAACGCGAAGGGGGATCAAGCAACGCTGTTCCGAAAGGCTGTCTCGCTGTTTGCGTCGGGGAAGAGATGAAGAGGTTCATTATACCTACTGAATATCTCAGCCATCATGCATTTCATGTGTTACTGAGAGAAGCAGAAGAAGAATTCGGGTTTCAACAGACTGGTGTTCTGAGATTCCCTTGTCAAGTGCCAGTTTTTGAGAGTATCTTAAAGATGGTGCAGGGAAGGAACGACCAATCTAGCACTCAAGAATGCAGACTTAAAGTTGAAGAGATATTGGGACACTGCTCATTAGAACGCCAGCTTGCTTACTCTCCCCATCCCCAGAGTCCAATGTGCAGATAG 507 0.4398 MDPKKSNKIRDIVRLQQILKKWRKQANSPKTSDSNNSGSSNKSIKFLKRTLSISEREGGSSNAVPKGCLAVCVGEEMKRFIIPTEYLSHHAFHVLLREAEEEFGFQQTGVLRFPCQVPVFESILKMVQGRNDQSSTQECRLKVEEILGHCSLERQLAYSPHPQSPMCR 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3563g00038 168 Pfam Auxin responsive protein 20 127 IPR003676 GO:0009733
Pral3563g00038 168 MobiDBLite consensus disorder prediction 21 42 - -
Pral3563g00038 168 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 123 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3563g00038 Pral-Chr3563 136363 137025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3563g00038 1 168 Calmodulin-binding Proteins AT2G24400 54.348 3.96e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3563g00038 K14488 - qsa:O6P43_015557 239.195