Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3563g00035 ATGATGGAGACGAAGCCGGCCGCCGTCTTGCCTGCCTGCAGCGCCACTCAATCCCAATCTCTGCACGCTTCGTCGGTTCTCTCCACCGTCTGCAACATGAAACGGACACCGTCCGAGTTGGCCCTGGAAGAGTTCCTGAATAAGGCGGTGCCACCATCGACCGACGACGACGACGACGACGTGAAACCGTGCGAAGTTTGGGAGCTCGCACACAAAAGCTTCCCCCACCCGGACACATTTCTCGCCGGCGTCGGCTCCGACGATTTCGATCACGCTTTTCGAAACTCGGATGCGGTGACTGCGTTTTCAACTTGCAAGGGACTACCAGATTCACTTTTATGGTCTCCGGATGCCACTCCCAAGGATTCACCTCTCTGTGCACCGATTGAATCTCAGTCATCTATTTGTGGTACCAGTGTTTGCAGCCCTGTGTCAGCTAATCAACCAGCCGTCGGTGATAATCAAGCCAAAGGAACCACAAGTGCTTCGTCTCGTGAGCAATCTGATGAAGATGACGTAGCAGGTCCTTGTGATCAGAGCACAAACCCCATTGATATGAAGCGTCTCAGAAGGAAGGTTTCTAATAGGGAATCTGCCAGGAGATCCAGAAGAAGAAAACAAGCACATCTGGCTGATCTTGAGACGCAGGTTGAGCAACTGAGATTGGAGAATGCAGCTCTGTACAAGCAGCTTACAGATGCCAGTCAGCAATTTCGCGATGCCAATACAAATAACCGAGTGCTCAAATCGGATGTCGAAGCTTTGAGAGCCAAGGTGAAGTTAGCTGAAGATATGTTGACTAGGGGTTCCTTCTCCACCTTAAACAACTCGCTTGTTCAGAATCAGAGTCAGCTAAACGCACCACCACAACTCAACAACACTACCCTGCGTATGGCGCATGTCTCGCCCACCATCACTGTCCAAGGTAGTGATGCCTCATATGCTTCTATTGCAGTTGATGATCACAATTCATCTCTTGGTCTTGGGAACTTACATATCAGTAACAGCAATGGCAATTATAACTCTGGAGTTATTAGTGATGCTATGAGCTGTATCAACGGAATATATCGTTGA 1074 0.4963 MMETKPAAVLPACSATQSQSLHASSVLSTVCNMKRTPSELALEEFLNKAVPPSTDDDDDDVKPCEVWELAHKSFPHPDTFLAGVGSDDFDHAFRNSDAVTAFSTCKGLPDSLLWSPDATPKDSPLCAPIESQSSICGTSVCSPVSANQPAVGDNQAKGTTSASSREQSDEDDVAGPCDQSTNPIDMKRLRRKVSNRESARRSRRRKQAHLADLETQVEQLRLENAALYKQLTDASQQFRDANTNNRVLKSDVEALRAKVKLAEDMLTRGSFSTLNNSLVQNQSQLNAPPQLNNTTLRMAHVSPTITVQGSDASYASIAVDDHNSSLGLGNLHISNSNGNYNSGVISDAMSCINGIYR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3563g00035 357 Pfam bZIP transcription factor 186 234 IPR004827 GO:0003700|GO:0006355
Pral3563g00035 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 248 IPR004827 GO:0003700|GO:0006355
Pral3563g00035 357 Gene3D - 186 243 - -
Pral3563g00035 357 FunFam BZIP transcription factor 185 236 - -
Pral3563g00035 357 PANTHER BASIC LEUCINE ZIPPER 63 19 339 - -
Pral3563g00035 357 SUPERFAMILY Leucine zipper domain 187 237 IPR046347 GO:0003700|GO:0006355
Pral3563g00035 357 SMART brlzneu 183 247 IPR004827 GO:0003700|GO:0006355
Pral3563g00035 357 Coils Coil 196 265 - -
Pral3563g00035 357 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 190 205 IPR004827 GO:0003700|GO:0006355
Pral3563g00035 357 MobiDBLite consensus disorder prediction 146 210 - -
Pral3563g00035 357 MobiDBLite consensus disorder prediction 146 163 - -
Pral3563g00035 357 CDD bZIP_plant_GBF1 188 239 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3563g00035 Pral-Chr3563 123231 126831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3563g00035 33 356 bZIP Transcription Factor Family AT5G24800 40.729 1.78e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral3563g00035 bZIP_1 8.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3563g00035 K25784 - qsa:O6P43_015554 358.221