Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3563g00033 ATGGAGACGAAGCCGGCCGCCGTCTTGCCTGCCTGCAGCGCCACTCAATCCCAATCTCTGCACGCTTCGTCGGTTCTCTCCACCGTCTGCAACATGAAACGGACACCGTCCGAGTTGGCCCTGGAAGAGTTCCTGAATAAGGCGGTGCCACCATCGACCGACGACGACGACGACGACGTGAAACCGTGCGAAGTTTGGGAGCTCGCACACAAAAGCTTCCCCCACCCGGACACATTTCTCGCCGGCGTCGGCTCCGACGATTTCGATCACGCTTTTCGAAACTCGGATGCGGTGACTGCGTTTTCAACTTGCAAGGGACTACCAGATTCACTTTTATGGTCTCCGGATGCCACTCCCAAGGATTCACCTCTCTGTGCACCGATTGAATCTCAGTCATCTATTTGTGGTACCAGTGTTTGCAGCCCTGTGTCAGCTAATCAACCAGCCGTCGGTGATAATCAAGCCAAAGGAACCACAAGTGCTTCGTCTCGTGAGCAATCTGATGAAGATGACGTAGCAGGTCCTTGTGATCAGAGCACAAACCCCATTGATATGAAGCGTCTCAGAAGGAAGGTTTCTAATAGGGAATCTGCCAGGAGATCCAGAAGAAGAAAACAAGCACATCTGGCTGATCTTGAGACGCAGGTTGAGCAACTGAGATTGGAGAATGCAGCTCTGTACAAGCAGCTTACAGATGCCAGTCAGCAATTTCGCGATGCCAATACAAATAACCGAGTGCTCAAATCGGATGTCGAAGCTTTGAGAGCCAAGGTGAAGTTAGCTGAAGATATGTTGACTAGGGGTTCCTTCTCCACCTTAAACAACTCGCTTGTTCAGAATCAGAGTCAGCTAAACGCACCACCACAACTCAACAACACTACCCTGCGTATGGCGCATGTCTCGCCCACCATCACTGTCCAAGGTAGTGATGCCTCATATGCTTCTATTGCAGTTGATGATCACAATTCATCTCTTGGTCTTGGGAACTTACATATCAGTAACAGCAATGGCAATTATAACTCTGGAGTTATTAGTGATGCTATGAGCTGTATCAACGGAATATATCGTTGA 1071 0.4967 METKPAAVLPACSATQSQSLHASSVLSTVCNMKRTPSELALEEFLNKAVPPSTDDDDDDVKPCEVWELAHKSFPHPDTFLAGVGSDDFDHAFRNSDAVTAFSTCKGLPDSLLWSPDATPKDSPLCAPIESQSSICGTSVCSPVSANQPAVGDNQAKGTTSASSREQSDEDDVAGPCDQSTNPIDMKRLRRKVSNRESARRSRRRKQAHLADLETQVEQLRLENAALYKQLTDASQQFRDANTNNRVLKSDVEALRAKVKLAEDMLTRGSFSTLNNSLVQNQSQLNAPPQLNNTTLRMAHVSPTITVQGSDASYASIAVDDHNSSLGLGNLHISNSNGNYNSGVISDAMSCINGIYR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3563g00033 356 MobiDBLite consensus disorder prediction 145 162 - -
Pral3563g00033 356 CDD bZIP_plant_GBF1 187 238 IPR045314 GO:0003700|GO:0006355
Pral3563g00033 356 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Pral3563g00033 356 FunFam BZIP transcription factor 184 235 - -
Pral3563g00033 356 SUPERFAMILY Leucine zipper domain 186 236 IPR046347 GO:0003700|GO:0006355
Pral3563g00033 356 SMART brlzneu 182 246 IPR004827 GO:0003700|GO:0006355
Pral3563g00033 356 Pfam bZIP transcription factor 185 233 IPR004827 GO:0003700|GO:0006355
Pral3563g00033 356 Gene3D - 185 242 - -
Pral3563g00033 356 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 247 IPR004827 GO:0003700|GO:0006355
Pral3563g00033 356 Coils Coil 195 264 - -
Pral3563g00033 356 PANTHER BASIC LEUCINE ZIPPER 63 18 338 - -
Pral3563g00033 356 MobiDBLite consensus disorder prediction 145 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3563g00033 Pral-Chr3563 123231 139524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3563g00033 32 355 bZIP Transcription Factor Family AT5G24800 40.729 1.84e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral3563g00033 bZIP_1 8.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3563g00033 K25784 - qsa:O6P43_015554 358.221