Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3563g00021 ATGCAAAAGGAGAAGGAATCAAGCAAAGAGGGGAAGGGGAGGGAGAGGGAGATGGAGATGGAAAGGTGTGGAGAAAAAGAGGAAATCCTTCCACCGGGATTTCGATTCCATCCTTCAGATGAAGAGCTCATCACTCACTATCTCATAAACAAGATCTCTGATTCTAGCTTTACAGGAAGAGCAATTGGTGATGTGGATCTCAACAAATGCGAGCCTTGGGAGCTCCCAGGGAAGGCGAAGATGGGAGAGAAGGAATGGTACTTCTTCAGTCTGAGAGATCGGAAGTACCCGACTGGTGTGAGAACGAATCGAGCAACGAACACAGGCTACTGGAAAACCACAGGCAAAGACAAGGAAATCGTCAACGCCGCCACATCGGAGCTCCTGGGCATGAAGAAGACTTTGGTCTTCTACAAAGGCAGAGCCCCAAGAGGCGAGAAAACCAACTGGGTCATGCACGAATACCGCATTCACTCTAAAACCAACAAGCAAGATGAATGGGTGGTATGCCGAGTGTTTCAGAAGAGTGGGAGCGTGGTAAAGAAGTTCCCTTCGAACCATGCAAGAGGACTGAATCCTTATGGCCTGGACATAGCAGGTTTTACTGGTGGTCCTGGTGCGAGTATTAATATGCCACCATCGGTGATGAATATGATGCACCTTGGAGATCCAGCAGCTCATTTCCTTTACGGAAGGAACAATAATAATTACATGATGGGTAATTCTGTACCAAGCAATAATACTAGTCTGAACCTACCAATGCAATCCCATCAGTTCAACAACTATCCCGTTACAGCATCAGGAGGGTTCAGTATCTCAGGACTCAATTTGAATCTGGGAAACGCATCAGTAGTTGCAGAGGGAGGAACACCCACCTCACAACCCTTTTTGCGACCATTCAGTAACCAACACGATTTGTTGACTTCTAACAACGTTGTCACACCTGTCACTTCTGTCGCTGCAGACAACCTGGGGGGCTATGGTATGGACATGAACAACGTTAATCCTCAGACTCAGAGTACTAGGTATATGGGCATGGCAGATCACTGTGTGGATCTCGATGCTTACTGGCCTTCCTACTGA 1083 0.4737 MQKEKESSKEGKGREREMEMERCGEKEEILPPGFRFHPSDEELITHYLINKISDSSFTGRAIGDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIVNAATSELLGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKTNKQDEWVVCRVFQKSGSVVKKFPSNHARGLNPYGLDIAGFTGGPGASINMPPSVMNMMHLGDPAAHFLYGRNNNNYMMGNSVPSNNTSLNLPMQSHQFNNYPVTASGGFSISGLNLNLGNASVVAEGGTPTSQPFLRPFSNQHDLLTSNNVVTPVTSVAADNLGGYGMDMNNVNPQTQSTRYMGMADHCVDLDAYWPSY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3563g00021 360 SUPERFAMILY NAC domain 26 175 IPR036093 GO:0003677|GO:0006355
Pral3563g00021 360 FunFam NAC domain-containing protein 100-like 39 179 - -
Pral3563g00021 360 ProSiteProfiles NAC domain profile. 30 175 IPR003441 GO:0003677|GO:0006355
Pral3563g00021 360 Gene3D NAC domain 39 179 IPR036093 GO:0003677|GO:0006355
Pral3563g00021 360 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 27 242 - -
Pral3563g00021 360 Pfam No apical meristem (NAM) protein 31 157 IPR003441 GO:0003677|GO:0006355
Pral3563g00021 360 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3563g00021 Pral-Chr3563 97440 99668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3563g00021 25 360 NAC Transcription Factor Family AT2G24430 48.199 4.01e-97 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral3563g00021 NAM 6.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3563g00021 - - gmx:100804931 405.216