Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3563g00017 ATGGGAGCTACAGAAATAAAACATATGGAAAGGGAACGAACCCGGAAACGGCCTCGTTTAACGTGGGACGATGCCCCATCTTCTGAGACCGAGGCGCAAAGGGCTCTTGTGATGGGCGATGGAGTGTTTCAAAATAGGCATGCATCGCCTCCAAGAAGGGACGACGATCGTGAAGGCCATTACGTGTTTAGTCTTGGCGAAAATCTCACTCCTAGATATAAAAAATCCTCCAGCAAGATGGGTGAAGGCACGTTTGGTCGAGTTTTGGAATGTTGGGACCGCCAAACACGAGAATATGTGGCCATCAAAGTAGTTAGAAGCATACCAAAGTACCGTGACGCAGCAATGATTGAGGTTGATGTGCTTCAACGTCTAGCCAAGAATGAGAGAGGCAATTCACGTTGTGTACACATTCGGAACTGGTTTGATTACCGGAATCATATTTGTATTGTGTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTTAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGGGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGACCTACGCCTAATCCACACTGACCTGAAGCCAGAAAATATACTTCTGGTTTCTGAATTCGTAAAGATCCCTAGCTGTAAGAGGGTTTTCTCAGACGAAATGCAATTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATTTGATAACCAGAACCATAGCTCCATTGTTTCTACAAGGCATTACCGAGCCCCTGAGATTATCCTAGGTCTAGGGTGGTCATTCCCATGCGATTTGTGGAGTGTCGGATGTATTCCTTTTTGCATGTGCAACTTTTGTCAGGGCAAAGCACTGTTTCAGACTCATGAAAACTTGGAGCACTTGGCAATGATGGAGAGAGTGCTGGGGCCTCTCCCTGAGCACATGGCTCGAAGGTCTAACCGAGGTGCTGAAAAGTATTTTAGGCATGGAACACGACTAAATTGGCCTGAAGGGGCTGTTTCAAGGGAGAGTATTCGGGCAGTGAGGAAGCTTGATCATCTAAAGGAACTTGTAGCACGCCAAATGGACTCCTCAAGATCCTCTTTAACTGATTTGTTACATGGATTACTGGCCTATGATCCGGCTAACCGTCTAACGGCTCGCCAAGCCCTCGATCATCCCTTCTTTAGGAATCCCACTTGA 1218 0.4573 MGATEIKHMERERTRKRPRLTWDDAPSSETEAQRALVMGDGVFQNRHASPPRRDDDREGHYVFSLGENLTPRYKKSSSKMGEGTFGRVLECWDRQTREYVAIKVVRSIPKYRDAAMIEVDVLQRLAKNERGNSRCVHIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLXVSEFVKIPSCKRVFSDEMQFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEIILGLGWSFPCDLWSVGCIPFCMCNFCQGKALFQTHENLEHLAMMERVLGPLPEHMARRSNRGAEKYFRHGTRLNWPEGAVSRESIRAVRKLDHLKELVARQMDSSRSSLTDLLHGLLAYDPANRLTARQALDHPFFRNPT 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3563g00017 406 Pfam Protein kinase domain 77 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3563g00017 406 ProSiteProfiles Protein kinase domain profile. 74 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3563g00017 406 Gene3D Phosphorylase Kinase; domain 1 60 154 - -
Pral3563g00017 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Pral3563g00017 406 FunFam Serine/threonine-protein kinase AFC2 150 402 - -
Pral3563g00017 406 SMART serkin_6 74 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3563g00017 406 Gene3D Transferase(Phosphotransferase) domain 1 128 402 - -
Pral3563g00017 406 MobiDBLite consensus disorder prediction 1 24 - -
Pral3563g00017 406 CDD PKc_CLK 60 402 - -
Pral3563g00017 406 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 17 404 - -
Pral3563g00017 406 SUPERFAMILY Protein kinase-like (PK-like) 60 404 IPR011009 -
Pral3563g00017 406 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3563g00017 Pral-Chr3563 79985 84644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3563g00017 238 406 EF-hand Containing Proteins AT5G22840 31.111 6.43e-17 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Pral3563g00017 Pkinase 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3563g00017 K08287 - gmx:100782453 687.952