Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3561g00131 ATGGAGCAGGGTGTAACCAATTCTGATTTAGCACCACGGAAATTGTCTCGGCCATTGGATTTCACGGCCATCGGTGGAGATTCAGTGAACGTAGAATTGCCGAGGGCGCCTGAATGTCAGACATACTTAGAACTATCACCACTGATGCAGAAACAGCTGCCGCAATCGACTTTGCCGCCACAATCACTATCGCCGTCTCAAATACAAGTTGAACCGAAGTTCCAGTCGCAGGCATGCTCACCGACGCAAACAAAGTTACCTATACGGTCGCAGGGGCAGCAGCCATGGTCATCTTCACACACTCAACATCAGCGAACACCGCAATCTCAGGTTAAGCAGCAATCGCAACCGCGGCCGCATCTAGTTTCACCTGTTAGTCGAATTCCGCACCCTGTGCAGAAAATTTCGACGACGACGTTACTAGTATCCAAGCAAGAGTCTCCTAGTTCACGACCTGGGCATAATGGGGAATCAAAGGACAGCACTCCAAAGAAACAAAAGCACTGCAACTGCAAGAATTCTCGCTGCCTCAAATTGTACTGCGAGTGTTTTGCAGCTGGGATCCACTGTGATGGTTGCAACTGCTTAAATTGTCATAATAATGTGGATAATGAGGCTGCCAGACAGGAGGCAGTTGGAATAATTTTAGTGCGCAATCCAAATGCCTTCAGGCCTAAAATTGCTAGCAGTCCCCAAGAACCACGGGTTTCGAAGGAAGAGGCTGAAACTCAAGTATTAGGGAAGCATAATAAAGGATGTCACTGCAAGAAATCAGGCTGCCTTAAGAATTATTGTGAGTGTTTCCAAGCCAGTGTCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTGAAGCAAGAAGGGCTCTTGATGCAATTAACCTCAAACAGGCAGCTAATGATGCCATCAGTCAAGCAATTGGGTCCTCTGGCAATGGGATGGGCGCAACACCCAAGAAAAGAAAACTTAAGGAAATATTTTCTGGCAAAGCTGCCATAGATAAAGGTGTTTTGACTGCTCAGTTTCAACAGGAAAATGAGCCAGTGGTTGCGACACCTGCTCCATCTGTGTCTGTTGCCTCTGACATTGCCAAGGTAACAATTCCAGGGTCTTCCCGATCAACATACAGGTCCCCACTGGTGGATGCACTCCAGCCACAGGATGTGAAGTATCTCTGTTCACTTTTTGTTGTTCTATCCGGAGTAGCCGCAAAGACATATGCAGAGTCAAGAGTCAGGGTAGACCAGCAAATGGAGATCAAGAAATTTGAAACTTCTTTTGCTTCATCAGCTGAATTACTGCAAGACAATAAAGAAGTCCACAAGCCTGTTTTTGGTGAACATTCAAAGAGAAATGGAGCAGAGAGAAGTGGCAGTAGTGATTCTGGATCAGATGCAGTTGATATACAGAACTCCGTGAGGCCATTGTCACCAGGAACGCTAGCATTGATGTGTGATGAACAAGATGAGATGTTTCTTTCCAATAGTTCTGCCAATGCCGTGGCTTGCAATGATCAAAAAATGATTCATAAGCCATCAAATTCTGATGTTTACATGGACATTTATGGAGAGCAGGAACGGCTTGTGCTCACCAGGTTTTGGGACGTTCTCCGTGGACTCATCACCCGTGGAAGCATAAAAGAAGCGACGTGCTCCCCATTAGCCATGAAAGAGGTGGGAAGCAAACAAGAAGCAGCTGATAATGGCAATAATGGAGCTGAACCTGATTTAAGAAGTGAGAAGGGGAAGGGAGTTCACATGCACAGCAATTGCATTGCAAATTCCCGCATCCCGTTGTCCACTGAAGTATCTGAGACAAGTAGTGCAATGCCTAATGAACAAGATAATGATGATCTGTCATTGAGGATCGGTCTGCCTACTGGAATTGCTGGGTTGACATAA 1917 0.4591 MEQGVTNSDLAPRKLSRPLDFTAIGGDSVNVELPRAPECQTYLELSPLMQKQLPQSTLPPQSLSPSQIQVEPKFQSQACSPTQTKLPIRSQGQQPWSSSHTQHQRTPQSQVKQQSQPRPHLVSPVSRIPHPVQKISTTTLLVSKQESPSSRPGHNGESKDSTPKKQKHCNCKNSRCLKLYCECFAAGIHCDGCNCLNCHNNVDNEAARQEAVGIILVRNPNAFRPKIASSPQEPRVSKEEAETQVLGKHNKGCHCKKSGCLKNYCECFQASVLCSENCKCMDCKNFEGSEARRALDAINLKQAANDAISQAIGSSGNGMGATPKKRKLKEIFSGKAAIDKGVLTAQFQQENEPVVATPAPSVSVASDIAKVTIPGSSRSTYRSPLVDALQPQDVKYLCSLFVVLSGVAAKTYAESRVRVDQQMEIKKFETSFASSAELLQDNKEVHKPVFGEHSKRNGAERSGSSDSGSDAVDIQNSVRPLSPGTLALMCDEQDEMFLSNSSANAVACNDQKMIHKPSNSDVYMDIYGEQERLVLTRFWDVLRGLITRGSIKEATCSPLAMKEVGSKQEAADNGNNGAEPDLRSEKGKGVHMHSNCIANSRIPLSTEVSETSSAMPNEQDNDDLSLRIGLPTGIAGLT 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3561g00131 638 MobiDBLite consensus disorder prediction 461 476 - -
Pral3561g00131 638 MobiDBLite consensus disorder prediction 130 156 - -
Pral3561g00131 638 MobiDBLite consensus disorder prediction 53 121 - -
Pral3561g00131 638 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 166 201 IPR005172 -
Pral3561g00131 638 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 251 285 IPR005172 -
Pral3561g00131 638 ProSiteProfiles CRC domain profile. 165 288 IPR005172 -
Pral3561g00131 638 MobiDBLite consensus disorder prediction 446 476 - -
Pral3561g00131 638 PANTHER TESMIN/TSO1-RELATED 53 551 IPR028307 -
Pral3561g00131 638 MobiDBLite consensus disorder prediction 53 169 - -
Pral3561g00131 638 MobiDBLite consensus disorder prediction 565 588 - -
Pral3561g00131 638 MobiDBLite consensus disorder prediction 1 30 - -
Pral3561g00131 638 MobiDBLite consensus disorder prediction 607 627 - -
Pral3561g00131 638 SMART CXC_2 164 204 IPR033467 -
Pral3561g00131 638 SMART CXC_2 248 289 IPR033467 -
Pral3561g00131 638 MobiDBLite consensus disorder prediction 446 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3561g00131 Pral-Chr3561 772286 777754 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3561g00131 13 564 CPP Transcription Factor Family AT4G29000 43.182 6.03e-125 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pral3561g00131 TCR 3.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3561g00131 K21776 - gmx:100811459 641.728