Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3561g00112 ATGACTGCAGAAACCCAGAATTCTGAAACAGAGAGCACATCAAACTCAAGCTCGTCCCCATCTTCCCCAACATCGCCACACTCTCCTCCTTCAGCTCTGCCTCTCCAAAACTCTGTTTTGCGAGCTAAAGCTGAGAGCCCAGAATCCAAAAAAGTGAAAAGAATTCGAGACTCCAGCAAGCACCCAGTGTACCGCGGGGTCCGCATGCGAAACTGGGGTAAATGGGTATCTGAAATTCGCGAGCCTCGCAAGAAATCTCGCATATGGCTCGGTACATTTCCAACGCCGGAAATGGCAGCCAGAGCACATGACGTCGCCGCCCTGAGCATTAAAGGCAGCTCTGCTATTCTCAATTTCCCCGAGCTGATCGACCAGCTTCCTCGTCCTGCTTCACTCGCTCCTCGAGACGTTCAGGCGGCGGCAGCGAAGGCCGCTCAGATGGATAAGTTCGACCTGCCGACATCTTCGTCCTCGTCATCACTGTCATCGCTGGTGTCAGCAATGGACTTGAGTACTGAGTCAGAGGAACTGAGCGAGATAATAAAGCTTCCAAACTTGGAAACGAGCAGCGACGCGGTGGAATTGGTGAAGGAGTTTGTGTACGTGGACCCGGAAGAGGGATGGATGTACGAGCCACCGTGGCTACAGAGCATGGAGGATTGCGGCCGGTATGCAGCGGATCAGCTATGGAATTACTAG 699 0.5322 MTAETQNSETESTSNSSSSPSSPTSPHSPPSALPLQNSVLRAKAESPESKKVKRIRDSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGSSAILNFPELIDQLPRPASLAPRDVQAAAAKAAQMDKFDLPTSSSSSSLSSLVSAMDLSTESEELSEIIKLPNLETSSDAVELVKEFVYVDPEEGWMYEPPWLQSMEDCGRYAADQLWNY 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3561g00112 232 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 193 - -
Pral3561g00112 232 SUPERFAMILY DNA-binding domain 63 121 IPR016177 GO:0003677
Pral3561g00112 232 MobiDBLite consensus disorder prediction 1 22 - -
Pral3561g00112 232 CDD AP2 64 122 IPR001471 GO:0003700|GO:0006355
Pral3561g00112 232 ProSiteProfiles AP2/ERF domain profile. 63 120 IPR001471 GO:0003700|GO:0006355
Pral3561g00112 232 MobiDBLite consensus disorder prediction 44 60 - -
Pral3561g00112 232 SMART rav1_2 63 126 IPR001471 GO:0003700|GO:0006355
Pral3561g00112 232 MobiDBLite consensus disorder prediction 1 60 - -
Pral3561g00112 232 FunFam Ethylene-responsive transcription factor 2 62 121 - -
Pral3561g00112 232 Pfam AP2 domain 62 112 IPR001471 GO:0003700|GO:0006355
Pral3561g00112 232 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
Pral3561g00112 232 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Pral3561g00112 232 Gene3D AP2/ERF domain 63 121 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3561g00112 Pral-Chr3561 706836 707903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3561g00112 41 220 AP2-EREBP Transcription Factor Family AT5G11590 65.969 8.87e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral3561g00112 AP2 2.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3561g00112 K09286 - tcc:18587975 290.041