Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3561g00096 ATGGCCAAAGGAGTTCGTCAAACCTTTCCAAAAAGCCTCACGTTCATGTGCCTCGTCATGCTTGTGTTCAATCTTCGCTGCTCACAGTCACATGGAGATCAACAAGAACAAGAACTTCAGCTTCTGCTATCCTTCAAAGCTTCCACCAAGGACCCACGTCTGTCTCTTTCGAACTGGCTCAATTCTTCAACCACCTTCTGTAACTGGTACGGCCTCACCTGCGACCACAGCTCTTCTCACCTTAACTCCATCCAACTCGCAGGTAAAAACATGTCCGGCACGATTTCCTCGTCCATATTTCAGCTCCCAAATGTTAATAATATTGACCTCTCCAGCAATAAGTTCGCTGGGGAAATTTCTTCCTCGTCGTTCCCTTCGTCTCCCTCGTCACTTCGTTACCTTAATCTCAGCAACAACAACCTAACGGGCTCGTTGCCTCAGTTTTTATTTTCTGTGTCGTTTTCCCGCCTGGAATCCTTGGATCTTTCAAACAACATGTTTTCCGGGATGATTCCACATCAGGTTGGTCTTCTTTCCAGTCTAAAATATCTTGATGTCGGAGGGAACGTTCTGGTGGGAGGAATTCCAAATTCCATCACCAACATCACAGGTTTAGAATACTTAACATTGGCTTCGAACCAGTTGGTGGGTGAAATCCCGCGTGACATAGGTGTAATGAAGAGCTTGAAGTGGATTTACATGGGTTACAACAATCTCTCCGGTGAAATCCCGAAGAGCATAGGGAACTTACTGTCTCTGCATCATCTCGACCTTGTTTACAACAATCTCACGGGATTCATTCCCGAGTCCCTTGGAAACCTCACCAATCTTGAGTTTCTGTTCCTCTACAGAAACAACCTCATGGGCCCGATCCCCCCTTCCATTTTCGACCTGAAAAAGCTTGTTTCGCTTGATCTCAGTGATAATTCTCTATGGGGAGAGATTTCTGAACTTGTGATTAATCTTCAGAGACTGGAGATCCTTCAGCTTTTCTCAAACAACTTTACCGGAAAGATTCCGAGGGCTTTGACAGCTTTACCTCGGCTTCAAGTTCTTCAACTGTGGTCCAACAGATTAACGGGCGAGATTCCAAAAGAGCTGGGAATGCATAGCAACCTCACTGTTTTAGACCTTTCCACCAACCACCTTTCCGGAGAGATCCCACATCGCTTATGTGACTCGAGCAATCTTTACAAGCTTATTCTTTTCTCCAACTCTCTTGAAGGACAAATCCCACACAGTTTGAGCGCTTGTACAAGCCTACGCCGAGTACGCCTCCAGAACAACAAGCTATCCGGCCAATTACCCCCGGAATTCACCAAACTGCCAGAGGTATACTTGTTAGACATGTCTGGCAATAAACTTTCCGGGAGGATTGATGATCGGAAGTGGGACATGCCGGCGCTTCAGTTGCTGAATTTGGCTAAAAACAATTTCTCTGGAGAGTTACCCACCTCTTTCGGGAGTAATGAACTGGAGAACCTGGACTTATCGGAGAACCAGTTTTCTGGTTATATTCCACCTGGTGTGGGAAACTTATCGGAGCTCGTGCAGTTGAAACTTAACAGAAACAAGCTGTCCGGTAACATCCCAAATGAACTTTGTTCGTGCAAGAAGCTTGTGTCTTTAGACCTCAGTCACAATCAGCTTAGCGGGCAAATACCGATTAGTCTGGGAGAGATGCCAGTTCTAGGGATGCTTGATCTGTCTGAAAACCAATTGTGGGGTGAAATTCCTGAAAATTTAGGAAGCGCCGAATCCCTCGTAGAACTCAACATATCCTACAACCATTTTCACGGGAGGTTACCGTCCACAGGAGCTTTCCTTGCCATCAATAGCAGTGGCGTCGCTGGGAACGACCTTTGTGATAGTGATATTGACAGTAGAAGCGGTTTGCCACCCTGCACCAAAAGAGATGATAATAAGAATCCAATTTGGTGGTTTTTTCTGTTTGGGCTTGTAGGGTTCCCGCTTGTTGCTTTTCTCATTGTCTTCATACGCAGAAGACAGAACTCGGAGATAACCACAAGGGCTGAAAATGAAGACGGCACATGGGAAATGCGCTACTTTGACTCCAAGGCTTCAAAACTCATCACCATCCACGACGTATTATCTTCTGCAAAAGAAGGAGTTATGATCCCTAAAGGACGAAAAGAGACAATCCAGTTCGAGGTGAAAGAGATGAGCGACCTGAATTGCTTTTCCGAAGACATTGGTAAGCTTCGGCATCCAAACATCGTGAAGTTGAAGGGAATATGCAGGTGTGGGAAAGGTGGTTACTTGGTGTATGAATACGTGGAGGGAAAATATTTAAGCGATGTCCTTGGGAGTTTAAGCTGGGAACGACGACGGAATATTGCACTTGGAATTGCAAAAGCACTGAAGTATTTGCATGCTCATGATTCGCCGTTTGCTTTGGTCGGTGAGATGTCACCGGAGAGAGTTCTGGTGGACGCAAAAGATGTTCCTCGTCTCATGTTGAGCCCTCTCAAGCCTTCCATTTCTTCACCATACGTTGCTCCTGAATCGCGAAATGGGAAGGAGGTGACAGAGAAGAGTGACATATACGGAGTCGGGGTGATTCTGATAGAATTATTGACGGGAAGAAGTTCAGTGGACGAAGAAGCGGGCATGCAGCACGAGAGCATAGTGGAATGGGCCCGTTATTGTTATTCGGACTGTCATCTGGATACATGGGTCGACCCGATCATGAAGGGCGGGATTGCATCATCAGCTCAAAACGGCATCGTTGAGGTCCTGAACCTGGCCCTCCAGTGCACAGCCACCGACCCCACAGCTAGGCCGAGCGCAAGCCACGTGTTCAAAACCTTAAACGCTGTGACAGCTTCCCCATCGCCCTGTGTTTAA 2868 0.4676 MAKGVRQTFPKSLTFMCLVMLVFNLRCSQSHGDQQEQELQLLLSFKASTKDPRLSLSNWLNSSTTFCNWYGLTCDHSSSHLNSIQLAGKNMSGTISSSIFQLPNVNNIDLSSNKFAGEISSSSFPSSPSSLRYLNLSNNNLTGSLPQFLFSVSFSRLESLDLSNNMFSGMIPHQVGLLSSLKYLDVGGNVLVGGIPNSITNITGLEYLTLASNQLVGEIPRDIGVMKSLKWIYMGYNNLSGEIPKSIGNLLSLHHLDLVYNNLTGFIPESLGNLTNLEFLFLYRNNLMGPIPPSIFDLKKLVSLDLSDNSLWGEISELVINLQRLEILQLFSNNFTGKIPRALTALPRLQVLQLWSNRLTGEIPKELGMHSNLTVLDLSTNHLSGEIPHRLCDSSNLYKLILFSNSLEGQIPHSLSACTSLRRVRLQNNKLSGQLPPEFTKLPEVYLLDMSGNKLSGRIDDRKWDMPALQLLNLAKNNFSGELPTSFGSNELENLDLSENQFSGYIPPGVGNLSELVQLKLNRNKLSGNIPNELCSCKKLVSLDLSHNQLSGQIPISLGEMPVLGMLDLSENQLWGEIPENLGSAESLVELNISYNHFHGRLPSTGAFLAINSSGVAGNDLCDSDIDSRSGLPPCTKRDDNKNPIWWFFLFGLVGFPLVAFLIVFIRRRQNSEITTRAENEDGTWEMRYFDSKASKLITIHDVLSSAKEGVMIPKGRKETIQFEVKEMSDLNCFSEDIGKLRHPNIVKLKGICRCGKGGYLVYEYVEGKYLSDVLGSLSWERRRNIALGIAKALKYLHAHDSPFALVGEMSPERVLVDAKDVPRLMLSPLKPSISSPYVAPESRNGKEVTEKSDIYGVGVILIELLTGRSSVDEEAGMQHESIVEWARYCYSDCHLDTWVDPIMKGGIASSAQNGIVEVLNLALQCTATDPTARPSASHVFKTLNAVTASPSPCV 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3561g00096 955 SUPERFAMILY Protein kinase-like (PK-like) 738 944 IPR011009 -
Pral3561g00096 955 ProSiteProfiles Leucine-rich repeat profile. 130 152 IPR001611 GO:0005515
Pral3561g00096 955 SMART LRR_typ_2 466 489 IPR003591 -
Pral3561g00096 955 SMART LRR_typ_2 561 585 IPR003591 -
Pral3561g00096 955 SMART LRR_typ_2 202 226 IPR003591 -
Pral3561g00096 955 SMART LRR_typ_2 346 370 IPR003591 -
Pral3561g00096 955 SMART LRR_typ_2 129 152 IPR003591 -
Pral3561g00096 955 SMART LRR_typ_2 154 178 IPR003591 -
Pral3561g00096 955 SMART LRR_typ_2 274 298 IPR003591 -
Pral3561g00096 955 SMART LRR_typ_2 250 273 IPR003591 -
Pral3561g00096 955 SMART LRR_typ_2 371 394 IPR003591 -
Pral3561g00096 955 SMART LRR_typ_2 513 537 IPR003591 -
Pral3561g00096 955 FunFam Leucine-rich repeat receptor protein kinase EMS1 245 329 - -
Pral3561g00096 955 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Pral3561g00096 955 Pfam Leucine rich repeat 491 550 IPR001611 GO:0005515
Pral3561g00096 955 Pfam Leucine rich repeat 130 191 IPR001611 GO:0005515
Pral3561g00096 955 Pfam Protein kinase domain 739 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3561g00096 955 SUPERFAMILY L domain-like 52 388 - -
Pral3561g00096 955 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Pral3561g00096 955 PRINTS Leucine-rich repeat signature 157 170 - -
Pral3561g00096 955 PRINTS Leucine-rich repeat signature 298 311 - -
Pral3561g00096 955 Gene3D Transferase(Phosphotransferase) domain 1 768 952 - -
Pral3561g00096 955 Gene3D Ribonuclease Inhibitor 391 488 IPR032675 -
Pral3561g00096 955 Gene3D Phosphorylase Kinase; domain 1 707 767 - -
Pral3561g00096 955 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 153 244 - -
Pral3561g00096 955 Gene3D Ribonuclease Inhibitor 195 290 IPR032675 -
Pral3561g00096 955 Gene3D Ribonuclease Inhibitor 489 629 IPR032675 -
Pral3561g00096 955 Gene3D Ribonuclease Inhibitor 34 194 IPR032675 -
Pral3561g00096 955 Gene3D Ribonuclease Inhibitor 291 390 IPR032675 -
Pral3561g00096 955 ProSiteProfiles Protein kinase domain profile. 648 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3561g00096 955 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 330 631 - -
Pral3561g00096 955 PANTHER OS10G0469600 PROTEIN 179 269 - -
Pral3561g00096 955 SUPERFAMILY L domain-like 319 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3561g00096 Pral-Chr3561 619849 623414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3561g00096 18 944 Receptor kinase-like Gene Family AT2G25790 51.377 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Pral3561g00096 Pkinase 1.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3561g00096 - - gmx:100777118 1200.65