Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3561g00077 ATGGATCGTAAAACCGTTTTCTTTCTTATTCTTGTTTCCATGTCTTGTATTCCACTGGTCTTTAGTGTTAGTACCAATCAGTCTCACTTTTTTGTTCTCATGAAGGACTCTTTCTCCGGTAAGTACCCATCCAGTTGGGATGTCACCGGAGGAAAAGCTGTGTGCACCTTCACTGGGGTTGCCTGCAACAATCAAGGAAACGTCGTCAGTCTTGACGTCTCCGGTTGGTCGCTCTCGGGCGAGTTCCCTGAGAATATATGCTCTTACTTGCCGGAGTTACGTGTTCTTCGTCTCAGCAGTAACCGCCTCAAGGGAAACTTTCCCGACACCATTGTCAACTGTTCCCACTTGGAAGAGCTTAACATGAGTTACATGTCTCATGCTGGAAAGCTTCCTGACTTCTCACCTCTGACGTCTCTCAAGATTCTTGATTTGTCATATAACCTTTTCACGGGTCGGTTTCCCATGTCCTTGTTCAACCTCTCCAGTCTTGAGGTCCTTAACTTCAACGAAAATGAAGGCTTCAACTTATGGACGCTTCCGAAGGATGTTCACAAACTCAAAAATCTCAAGTCTATGGTGCTCACAACATGCATGTTGCAGGGCCAAATTCCGGCATCCTTAGGGAACCTTACGTCTCTTGTTGATCTTGAGTTGAGTGGAAACTTCCTCACTGGTCATATTCCTCCAGAGCTTGGGATGCTGAAAAATCTGCAATATCTCGAGCTGTACTATAACAGTCTTGTTGGTGTTATACCTGAGGAGCTAGGAAATCTCATGGAGCTCAGAGACTTTGATTTGTCAGTCAATAAGTTGACCGGGAAAATCCCAGAATCTATATGTCGCCTTCCCAAGCTTGAAGTCATGCAGCTTTACAACAATAGCCTCACAGGAGAAATCCCGGCCGTGATAGAAAACTCAACGTCCTTGAGTATACTGTCTATTTATGATAATTTCCTGAGTGGTCACGTCCCAAGAAATCTGGGTCAGTTCTCAGAATTGGTCGTTTTAGACATGTCTGAAAACCAACTATCCGGTCCATTGCCAACAGAGGTTTGCAAGGGAGGTAAACTGCTCTATTTTCTTGTCCTGGATAATTGGTTTTCTGGAGAGCTACCAGACATTTATGCAAAATGCTTGACTCTTTTGAGGTTCAGAGTGAGCAATAACCACTTGCAGGGCTCAATTCCTAGGGATCTCTTTGGCCTGCCTCATGTTTCAATAATTGATTTGGCATACAATAATTTTTCTGGTTCCATTTCTGAGTCCATTGGAAATTCTAGAAACTTGTCAGAGCTTTTCATACAGAGGAACCGAATTTCTGGACTCATACCTCCTACCATATCTCGTGCTGCCAATCTGGTCAAGATTGATCTCAGTTACAACCTTCTGTCTGGTCCAATACCCTCAGAAATCGGAAACCTGAAGAGGCTTAATTCACTGATGCTGCAAGGAAACAAGCTAAATTCTTCCATCCCCAGCTCATTTTCTTTATTGCAGTCCCTCAACGTTCTTGATCTCTCCAATAACCTCTTGAGTGGGAGCATCTCTGACAGTCTATCTGCACTCTTACCCAACTATATCAATTTCTCGAACAATTTGCTTTCTGGTCCAATTCCTTCCTCGTTGATGAAAGGAGGGCTATTAGAAAGCTTTTCAGGGAATCCTCGTCTCTGTGTGTTGCCGGTTTATGCTAACTCATCAGACCAGAATTTCCCTGTGTGCACACAAAGTAGCAGCAAAAAAAGGCCAAGTGTCATATGGGTAGGTGCAATTGCTGTAGCTTTGATCATCATTGGATTTGGAGCTGTATTGGCCATGAGACGTAGGCCTACCAAAAATAAGGCCTCAACGGAACAAGATGACGAGTCACTGTCTTCTTCATTCTTCTCTTACGACTTGAAGAGCTTCCACAAATTAAATTATGATCGGCAGGAGATCATTGAGGCCATGGTGGATAAGAATATAGTGGGGTACGGTGGATCCGGTACAGTGTATAAGATTGAGTTGAAGAGCGGTGAACTTGTTGCTGTCAAGAAGCTATGGAGTCGAACATCAAAGGATTCAGATCAAGAAGATCGCATGGTTTTGGACAAGGAGTTGAAAAATGAGGTAGCAACCTTAGGAAATATAAGACACAAGAACATAGTCAAACTGTACAGCTACTTCACGAGCTTTGACTTCAGCTTGTTGGTTTATGAGTACATGCCAAATGGTAATCTTTGGGACGCCCTGCACAAAAGTTGGATCAATTTGACTTGGCCTACTCGTCATCAGATCGCACTAGGGATAGCACAAGGTTTATCATACATCCACCACGATCTGCTTCCTCCTATTATCCACAGAGACATCAAGTCTACTAACATCCTCCTGGATGCTCATTACCAGCCCAAGGTTGCAGATTTTGGAATTGCCAAGGTTTTACAAGCAAGAGGAGGCAAAGATTCCACCACAACTGTGATTGCAGGAACCTACGGTTACTTAGCCCCAGAATATGCATATTCAGCTAGAGCAACAACCAAGTGTGATGTCTACAGTTTTGGGGTGATTCTAATGGAACTGATAACTGGGAAGAAGCCAGTGGAGGCAGAGTTTGGAGAGAACAGGAACATTGTATATTGGGTTTCAAACAAGGTAGACAGCAAGGAAGGGATTAATGAAATAATAGACGAGAGATTATCAGGGTTATTCAGGGAGGAAATTATACAAGTGATCCGAATTGCCATTAAGTGCACCTACAAATCTCCTGCTAATCGACCAACCATGAAGGAAGTGGTTCAACGACTCATTGAAGCAGATCCATGCAGATTCCATTCTGCCAAGTTGTCAGACAGGACCGACACCAAATAA 2850 0.4358 MDRKTVFFLILVSMSCIPLVFSVSTNQSHFFVLMKDSFSGKYPSSWDVTGGKAVCTFTGVACNNQGNVVSLDVSGWSLSGEFPENICSYLPELRVLRLSSNRLKGNFPDTIVNCSHLEELNMSYMSHAGKLPDFSPLTSLKILDLSYNLFTGRFPMSLFNLSSLEVLNFNENEGFNLWTLPKDVHKLKNLKSMVLTTCMLQGQIPASLGNLTSLVDLELSGNFLTGHIPPELGMLKNLQYLELYYNSLVGVIPEELGNLMELRDFDLSVNKLTGKIPESICRLPKLEVMQLYNNSLTGEIPAVIENSTSLSILSIYDNFLSGHVPRNLGQFSELVVLDMSENQLSGPLPTEVCKGGKLLYFLVLDNWFSGELPDIYAKCLTLLRFRVSNNHLQGSIPRDLFGLPHVSIIDLAYNNFSGSISESIGNSRNLSELFIQRNRISGLIPPTISRAANLVKIDLSYNLLSGPIPSEIGNLKRLNSLMLQGNKLNSSIPSSFSLLQSLNVLDLSNNLLSGSISDSLSALLPNYINFSNNLLSGPIPSSLMKGGLLESFSGNPRLCVLPVYANSSDQNFPVCTQSSSKKRPSVIWVGAIAVALIIIGFGAVLAMRRRPTKNKASTEQDDESLSSSFFSYDLKSFHKLNYDRQEIIEAMVDKNIVGYGGSGTVYKIELKSGELVAVKKLWSRTSKDSDQEDRMVLDKELKNEVATLGNIRHKNIVKLYSYFTSFDFSLLVYEYMPNGNLWDALHKSWINLTWPTRHQIALGIAQGLSYIHHDLLPPIIHRDIKSTNILLDAHYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSARATTKCDVYSFGVILMELITGKKPVEAEFGENRNIVYWVSNKVDSKEGINEIIDERLSGLFREEIIQVIRIAIKCTYKSPANRPTMKEVVQRLIEADPCRFHSAKLSDRTDTK 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3561g00077 949 FunFam receptor protein-tyrosine kinase CEPR1 634 735 - -
Pral3561g00077 949 Pfam Leucine rich repeat 428 488 IPR001611 GO:0005515
Pral3561g00077 949 ProSitePatterns Protein kinases ATP-binding region signature. 657 680 IPR017441 GO:0005524
Pral3561g00077 949 PRINTS Leucine-rich repeat signature 499 512 - -
Pral3561g00077 949 PRINTS Leucine-rich repeat signature 334 347 - -
Pral3561g00077 949 SUPERFAMILY L domain-like 63 353 - -
Pral3561g00077 949 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 25 177 - -
Pral3561g00077 949 SUPERFAMILY Protein kinase-like (PK-like) 642 929 IPR011009 -
Pral3561g00077 949 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 736 947 - -
Pral3561g00077 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Pral3561g00077 949 Gene3D Transferase(Phosphotransferase) domain 1 736 942 - -
Pral3561g00077 949 Pfam Protein kinase domain 653 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3561g00077 949 SMART LRR_typ_2 211 234 IPR003591 -
Pral3561g00077 949 SMART LRR_typ_2 90 114 IPR003591 -
Pral3561g00077 949 SMART LRR_typ_2 137 161 IPR003591 -
Pral3561g00077 949 SMART LRR_typ_2 283 307 IPR003591 -
Pral3561g00077 949 SMART LRR_typ_2 499 523 IPR003591 -
Pral3561g00077 949 SMART LRR_typ_2 475 498 IPR003591 -
Pral3561g00077 949 SMART LRR_typ_2 331 355 IPR003591 -
Pral3561g00077 949 SMART LRR_typ_2 235 259 IPR003591 -
Pral3561g00077 949 ProSiteProfiles Protein kinase domain profile. 651 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3561g00077 949 Gene3D Ribonuclease Inhibitor 294 570 IPR032675 -
Pral3561g00077 949 Gene3D Phosphorylase Kinase; domain 1 634 735 - -
Pral3561g00077 949 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Pral3561g00077 949 FunFam Receptor protein-tyrosine kinase CEPR1 283 569 - -
Pral3561g00077 949 SUPERFAMILY RNI-like 252 581 - -
Pral3561g00077 949 Gene3D Ribonuclease Inhibitor 27 177 IPR032675 -
Pral3561g00077 949 SMART serkin_6 651 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3561g00077 949 FunFam Leucine-rich repeat receptor-like protein kinase 178 279 - -
Pral3561g00077 949 Gene3D Ribonuclease Inhibitor 178 293 IPR032675 -
Pral3561g00077 949 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 179 930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3561g00077 Pral-Chr3561 482560 486078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3561g00077 24 934 Receptor kinase-like Gene Family AT5G49660 64.301 0.0 1181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3561g00077 Pkinase 8.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3561g00077 - - qsa:O6P43_015448 1334.7