Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3561g00065 ATGTCTACACTGCTGCTCGGCATAAGGGAGGACAAAGATCAAAGCGATGTCAATGTGTTGGCCTCCTCAACCACCATGGAAAGTGTTTGCCTCAACGGCTCCAAACTGAAAGAACGCAACTACATGGGATTGTCTGATTGTTCTTCAGTGGACAGCTCAGCTCAGTCCTTCTCGGACGAGAGTAAAACTAGGCTGAACCTAAAAGCTACAGAGCTGAGACTGGGGCTTCCGGGATCTCAATCTCCTGAAAGAGAAGACTCAGATCATCGGTGCTTTGAAAGTTCAACTCAATTCGATGAGAAACCTCTTTTTCCCTTGCATCCTTCAACGGATGATCAACATCGTTCGTCAAAGAATGTTGTTTTGGGTAACAAAAGAGGGTTCTCAGATGCTATGAATGAGTTCTCCAAGGGGCAATTCCTAGCAAATACGGAGGCGAATACAATTTTGTCACCTAAACCCTCTGCTAATTTAGGATTGAAAACAAGTGTTGTGCTCGATAAAGCAAAAGAAGCAGCACCACCAAAGGTGGAACAAGAGAGTCCCCATGTTGTGGACAAAACCAAACCAAACTATAATGTTTCTGCAAATAATAGCAGTATACATACTACTAAGGCACAGGTTGTGGGTTGGCCTCCTATTAGATCATTTAGGAAAAATTCATTGGCTACCACTACGAAAAATACTGAAGAAGTAGATGGAAAAGCACTGTTTGTCAAGGTCAGTATGGATGGTGCTCCATATTTAAGGAAAGTAGACTTGAAGAATTACCATGCATATACAGAACTATCTTCTTCTCTGGAGAAGATGTTCAGTTGTTTCACCATAGGTCAATGCGGATCTAATGGAACTCTGGGTAAGGGGATGCTGAATGAAAGCAAGATGAGAGATCTGCTTCGGGGGTCTGAATATGTTCTTACTTATGAGGACAAAGAAAGTGACTGGATGCTTGTGGGTGATGTTCCCTGGGAGATGTTTGTTGAGACATGCAGGAGGATGAGGATCATGAAGAGTTCTGAAGCCATTGGTTTAGCTCCCAGGAAGAAATAA 1050 0.4305 MSTLLLGIREDKDQSDVNVLASSTTMESVCLNGSKLKERNYMGLSDCSSVDSSAQSFSDESKTRLNLKATELRLGLPGSQSPEREDSDHRCFESSTQFDEKPLFPLHPSTDDQHRSSKNVVLGNKRGFSDAMNEFSKGQFLANTEANTILSPKPSANLGLKTSVVLDKAKEAAPPKVEQESPHVVDKTKPNYNVSANNSSIHTTKAQVVGWPPIRSFRKNSLATTTKNTEEVDGKALFVKVSMDGAPYLRKVDLKNYHAYTELSSSLEKMFSCFTIGQCGSNGTLGKGMLNESKMRDLLRGSEYVLTYEDKESDWMLVGDVPWEMFVETCRRMRIMKSSEAIGLAPRKK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3561g00065 349 MobiDBLite consensus disorder prediction 75 116 - -
Pral3561g00065 349 Pfam AUX/IAA family 70 347 IPR033389 -
Pral3561g00065 349 Gene3D - 230 348 - -
Pral3561g00065 349 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 64 343 IPR003311 GO:0005634|GO:0006355
Pral3561g00065 349 FunFam Auxin-responsive protein 231 348 - -
Pral3561g00065 349 ProSiteProfiles PB1 domain profile. 236 338 IPR000270 GO:0005515
Pral3561g00065 349 SUPERFAMILY CAD & PB1 domains 231 337 - -
Pral3561g00065 349 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3561g00065 Pral-Chr3561 395137 398578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3561g00065 250 341 B3 DNA Binding Superfamily AT1G19220 32.609 2.05e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pral3561g00065 AUX_IAA 3.5e-88 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3561g00065 K14484 - gmx:100818881 473.781