LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3561g00057	ATGCTGAAAGTGAATTCAATTCACTCGTCAGTTATCAGTACGGTTGCGCAGGCATTCTTGCTATTAGGGTTTACTGGTATGGGAAGAGGCAAGATCGTCATAAGGCGAATCGACAATTCGACGAGCCGGCAGGTAACTTTCTCGAAGCGAAGGAATGGTTTACTAAAGAAGGCCAAGGAGCTGGCAATACTGTGCGACGCTGAGGTCGGAGCCATCATCTTCTCCAGCACTGGTAAACTCTACGATTTCGCTAGCACCAGGCAAATGATGGGAGAAGAGCTGTCAAGTTTGACTATAAAAGAATTACAGGGTTTGGAAAGCCAAATGGAAATTAGCCTTCGGGGTGTCCGTATGAAAAAGGACCAACTTTTAATGAATGAAATACAAGAACTAAACCGAAAGGGTAGCCTTATACACCAAGAAAATGTGGAGCTTTATAAGAAGGTAAACCTACTTCGTCAAGAAAACATAGAATTAAATAAAAAGGTTTATGAAACAAGATATGGGAGCGCAACAAACAGAAACTCTGTTCTTATGAATGGTCTGGGCATAAGAGAGGACTTGCAAGTTCCTGTAAATCTCCAACTCAGCCAGCCAGAGCGATAA	606	0.4274	MLKVNSIHSSVISTVAQAFLLLGFTGMGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGAIIFSSTGKLYDFASTRQMMGEELSSLTIKELQGLESQMEISLRGVRMKKDQLLMNEIQELNRKGSLIHQENVELYKKVNLLRQENIELNKKVYETRYGSATNRNSVLMNGLGIREDLQVPVNLQLSQPER	201

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pral3561g00057	201	ProSiteProfiles	MADS-box domain profile.	27	87	IPR002100	GO:0003677\|GO:0046983
Pral3561g00057	201	PANTHER	SERUM RESPONSE FACTOR HOMOLOG	27	143	-	-
Pral3561g00057	201	Pfam	SRF-type transcription factor (DNA-binding and dimerisation domain)	36	83	IPR002100	GO:0003677\|GO:0046983
Pral3561g00057	201	SUPERFAMILY	SRF-like	28	90	IPR036879	GO:0003677\|GO:0046983
Pral3561g00057	201	Coils	Coil	142	162	-	-
Pral3561g00057	201	PRINTS	MADS domain signature	64	85	IPR002100	GO:0003677\|GO:0046983
Pral3561g00057	201	PRINTS	MADS domain signature	49	64	IPR002100	GO:0003677\|GO:0046983
Pral3561g00057	201	PRINTS	MADS domain signature	29	49	IPR002100	GO:0003677\|GO:0046983
Pral3561g00057	201	Gene3D	-	39	102	IPR036879	GO:0003677\|GO:0046983
Pral3561g00057	201	Pfam	K-box region	85	149	IPR002487	GO:0003700\|GO:0005634\|GO:0006355

Showing 1 to 10 of 13 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3561g00057	Pral-Chr3561	317312	329269	Tandem

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3561g00057	27	201	MADS-box Gene Family	AT2G22630	49.123	3.18e-61	189

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MADS-MIKC	Pral3561g00057		K-box	1.2e-19	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3561g00057	K09264		-	gmx:100812413	264.618

Showing 1 to 1 of 1 entries