Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3561g00032 ATGGCAGCCGTGAATCCGCAACCTTTGCAGGCGCGTCCATTCGAGAAACGCGTGCGGGACTCAGTACCAATGGAGGACGACGACGGTGACTATGAGGATGGGGGTGCTAGTGGTGATGCTATGGATGACTTGGAAGAGGGAAATATTAGTTCAGTGACTGTGCCAAACGACGGAGGAGTTGTTACGACTTCCCGAACTAGTGAGCTCACTCTCTCTTTCGAGGGTGAGGTTTATGTGTTTCCTGCTGTGACACCGGAAAAGGTGCAAGCTGTTTTGCTGCTTTTGGGAGGACGTGATGTGCCTGCATGTGCTCCTTCTATTGAAGTACCATTTGATGAAAGCAACAAGGGCATAGGTGATACTCCTAAGCAGTTGAACCTTTCAAGAAGAATAGCCTCCTTGGTTAGGTTCCGTGAAAAACGCAAGGAAAGATGTTTCGACAAGAAGATTAGGTACTCTGTGAGAAAAGAAGTGGCGCAAAGGATGCATCGCAAGAATGGGCAATTTGCATCCTCTAAAGAGAGTCCTGGTTCATCTAATTTGGATTCTGCGGAAAGCTTTCATCAGGATGGCACTCATTCCGGAACTTTACGTAGATGTCAACATTGTGGTGTTAGTGAAAATAATACTCCTGCAATGCGTCGTGGTCCAGCTGGACCAAGGACTCTATGTAATGCATGTGGCCTTATGTGGGCAAATAAGGGAACACTCAGAGATCTCAGTAAGGGAGGGAGAAATCTCTCTGTTGAGCAAAGTGAGCTGGAGACTCCTCTTGAAGTCAAACCTATTATCCTGGAAGGAGACTTGCTTGGCATCCATGACAAGCAGGGAATTTCTGAAGATCCTTCCAAGGCCGTTGCTGAAGGATCTAATAATCATGCTGTCAACCCAAGTGATGAGGAATTGCGGTCTGGTGAATGCTTACCAAACGCACTGTCATCAGGCTTTGTGCATTCTTCAGCAAATGATGAGGAGCAGTTGAGTCGGGTGACCAATGTCGTTAAGCAGAGTTGTGTTAGTAACATTATTGTGTTACTGTTGCACTCTGGTCGTTGCCTTACATGA 1065 0.4685 MAAVNPQPLQARPFEKRVRDSVPMEDDDGDYEDGGASGDAMDDLEEGNISSVTVPNDGGVVTTSRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPACAPSIEVPFDESNKGIGDTPKQLNLSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFASSKESPGSSNLDSAESFHQDGTHSGTLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRNLSVEQSELETPLEVKPIILEGDLLGIHDKQGISEDPSKAVAEGSNNHAVNPSDEELRSGECLPNALSSGFVHSSANDEEQLSRVTNVVKQSCVSNIIVLLLHSGRCLT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3561g00032 354 MobiDBLite consensus disorder prediction 165 198 - -
Pral3561g00032 354 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 195 244 - -
Pral3561g00032 354 ProSiteProfiles CCT domain profile. 130 172 IPR010402 GO:0005515
Pral3561g00032 354 ProSitePatterns GATA-type zinc finger domain. 200 227 IPR000679 GO:0006355|GO:0043565
Pral3561g00032 354 ProSiteProfiles GATA-type zinc finger domain profile. 194 253 IPR000679 GO:0006355|GO:0043565
Pral3561g00032 354 Pfam GATA zinc finger 200 236 IPR000679 GO:0006355|GO:0043565
Pral3561g00032 354 Pfam CCT motif 130 172 IPR010402 GO:0005515
Pral3561g00032 354 MobiDBLite consensus disorder prediction 25 40 - -
Pral3561g00032 354 Pfam tify domain 65 96 IPR010399 -
Pral3561g00032 354 SMART tify_2 62 97 IPR010399 -
Pral3561g00032 354 CDD ZnF_GATA 199 243 IPR000679 GO:0006355|GO:0043565
Pral3561g00032 354 MobiDBLite consensus disorder prediction 280 304 - -
Pral3561g00032 354 PANTHER GATA TRANSCRIPTION FACTOR 28 3 332 IPR045280 GO:0006355
Pral3561g00032 354 ProSiteProfiles Tify domain profile. 62 97 IPR010399 -
Pral3561g00032 354 MobiDBLite consensus disorder prediction 161 198 - -
Pral3561g00032 354 Gene3D - 195 247 IPR013088 GO:0006355|GO:0008270
Pral3561g00032 354 SMART GATA_3 194 247 IPR000679 GO:0006355|GO:0043565
Pral3561g00032 354 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3561g00032 Pral-Chr3561 185555 191107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3561g00032 24 260 Tify Gene Family AT1G51600 47.955 1.43e-66 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pral3561g00032 CCT 8.6e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3561g00032 - - qsa:O6P43_019551 467.233