Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3561g00016 ATGGACGCTAGCAGAATGGAAGCCGAGCGGCTGCTTGGGCTCGCCGAAAAACTCTTACAGAACCGGGATCTCAATGGCTCAAGGGACTTTGCCATTTTAGCTCAGGAAGCCGAACCGCTTCTGGAAGGTTCCGATCAGATCTTAGCCGTCATCGACGTGCTTCTCGCGGCGGATAAACGCGTCAACAATCACCACGACTGGTACGCGATTCTTCAGGTGGATCGTCGATCCAACGATTTCGATCTCATCAAAAAACAGTATCGTCGGCTCGCGCTTCTCCTTCACCCGGACAAGAACAGGTTCTCTCTGGCCGATCATGCTTTCAGGCTCGTTGCCGAGGCATGGGCCGTGCTATCGGACCAGACTAAGAAGGCACACTTCGACAAGGAGCTCAGCTTCTTTACCAGGGTAGACTTGAGTATGCCCAGCTGGGTTCAACAAGAAAAATTGCCGGTTCGTAGGGGTGGACCTGGGCCCAGTGAACGGAGTCAAGGTCATGATCCGTGGAATGGTGGCAACGCCGCGAGGGAGGAAGAAGGGGATGAGAACCCGGGGCGGAGGCCGACCTTCTGGACGACATGCCCGTACTGTTACTATATATACGAGTACCCTAAGATTTATGAGAATTGTTGTTTGAGGTGCCAGAACTGCGAGAAGTCTTTCCATGGTGTTTCTATTCCATCTTTGCCGCCTCTTGTGCCGGGACAAGATGCTTATCATTGTTGTTGGGGTTTCTTTCCGATGGGATTCTTTGTCGGTAATACGGGTGGCAAGTCGGGTGTGCCATCCACCCTCAATTCGCCACCACCGGTCTCAACTGCGCCGGTAGAGAATGGTATGCATAACGGGCAACCGCCGGCGGCCCCAATCTCTGCGGCTTCTAGGAGGGCGACGTCGGTTGTCTCGAATGGGACTGCTTCAGGGTTGGGTTTTGTTAAGCGGAAACGAGGAAGGCCTCGGAAAAATCCTTAG 972 0.5381 MDASRMEAERLLGLAEKLLQNRDLNGSRDFAILAQEAEPLLEGSDQILAVIDVLLAADKRVNNHHDWYAILQVDRRSNDFDLIKKQYRRLALLLHPDKNRFSLADHAFRLVAEAWAVLSDQTKKAHFDKELSFFTRVDLSMPSWVQQEKLPVRRGGPGPSERSQGHDPWNGGNAAREEEGDENPGRRPTFWTTCPYCYYIYEYPKIYENCCLRCQNCEKSFHGVSIPSLPPLVPGQDAYHCCWGFFPMGFFVGNTGGKSGVPSTLNSPPPVSTAPVENGMHNGQPPAAPISAASRRATSVVSNGTASGLGFVKRKRGRPRKNP 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3561g00016 323 MobiDBLite consensus disorder prediction 150 185 - -
Pral3561g00016 323 MobiDBLite consensus disorder prediction 260 323 - -
Pral3561g00016 323 ProSiteProfiles dnaJ domain profile. 66 131 IPR001623 -
Pral3561g00016 323 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 289 - -
Pral3561g00016 323 CDD DnaJ 66 120 IPR001623 -
Pral3561g00016 323 Pfam DnaJ domain 66 128 IPR001623 -
Pral3561g00016 323 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pral3561g00016 323 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pral3561g00016 323 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pral3561g00016 323 MobiDBLite consensus disorder prediction 260 279 - -
Pral3561g00016 323 SMART dnaj_3 65 123 IPR001623 -
Pral3561g00016 323 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
Pral3561g00016 323 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Pral3561g00016 323 Gene3D DnaJ domain 55 139 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3561g00016 Pral-Chr3561 90952 92723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3561g00016 4 323 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 46.939 4.88e-99 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3561g00016 - - gmx:100816918 410.223