Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3561g00014 ATGGACGGCGACTATTCATCATTTGTTGCCTCTCGGACGCAGACGTCCAGCCCCGGAGCCACCGTGGAGGTGGCCAAGAAACACAGGGGCCGCCCTAAAGGCTCCAAGAACAAGCCCAAGGCCGCTCGTCCTCTCGTACCCCGCAACGACATGATGGCTCCTTACGTTCTCGAAGTGCCTCACGGCAACGACGTCGTCCGGGCTATTTCCCAGTTTAGCCTCCACAAGAGCACCGGCCTCTGCATCCTTACTGCTTCCGGCGCCGTCGTTAACGCCTCCCTCTGTGTCTCCTCCGTCGCTTCCGCTCCTGACATCACTTGTCGCGGTTATCACGTCATCCTCTCCATGTCCGCCGCATTCAGCCCTCACCAATCCCTCACTTCGAATTACCCCCCCAAACCCCTCACCGTTAGCCTCGCCGCCCCCAACGGAAACGTCATCGGAGGGTTAGTCTCTGGCAGTTTGGTCTCGGCGGGGCCGGTCTACGTCATAGCAACTCCATTCAACAGCCCATCCTATCATAAGTTGTCATATGAAGATGAAGAGAACGGGCAAAACACGACTACCGGAGAAGGAGAAAGCGGGTACGCGCCGTCTCCTCTGCGTGGTGGGATCCCTGTGTATAGCGGTAACCAAGCCGCCGTTCATGGGTTTTGGGCTTCAGTGATCAGGCCGCCACAACCTGCACCCTCGACGCCTCCTCAGTATTCTTTTATTGGAGGCAATTCTATTCGAGGCACTGTCGAGTACTAA 753 0.5737 MDGDYSSFVASRTQTSSPGATVEVAKKHRGRPKGSKNKPKAARPLVPRNDMMAPYVLEVPHGNDVVRAISQFSLHKSTGLCILTASGAVVNASLCVSSVASAPDITCRGYHVILSMSAAFSPHQSLTSNYPPKPLTVSLAAPNGNVIGGLVSGSLVSAGPVYVIATPFNSPSYHKLSYEDEENGQNTTTGEGESGYAPSPLRGGIPVYSGNQAAVHGFWASVIRPPQPAPSTPPQYSFIGGNSIRGTVEY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3561g00014 250 SUPERFAMILY AF0104/ALDC/Ptd012-like 51 180 - -
Pral3561g00014 250 MobiDBLite consensus disorder prediction 7 21 - -
Pral3561g00014 250 CDD DUF296 54 168 IPR005175 -
Pral3561g00014 250 MobiDBLite consensus disorder prediction 1 45 - -
Pral3561g00014 250 Pfam Plants and Prokaryotes Conserved (PCC) domain 54 169 IPR005175 -
Pral3561g00014 250 ProSiteProfiles PPC domain profile profile. 48 191 IPR005175 -
Pral3561g00014 250 Gene3D - 54 186 - -
Pral3561g00014 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 192 IPR014476 GO:0003680
Pral3561g00014 250 MobiDBLite consensus disorder prediction 175 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3561g00014 Pral-Chr3561 72530 73877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3561g00014 20 228 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 42.857 8.68e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3561g00014 - - pcin:129294578 321.627