Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3561g00001 ATGGCACCCAGTTTCGATTGTGTCTCGGCACTTCTCTGCGCAGAAGACGACAGCATTTTCGACGATGGCGATTATGGAGCTACGATGGAGCCGTTGGACGTTACACGCGGACCCCGTAACCATAACCTGTGCTTTCATGATCGACACGATGGGTTGCCATTGCAGAGTGACGAGTGTTTAGCGCAAATGGTGCAAAAGGAATGCGACCACTTGCCTGCAGGAGATTACCTGAATAGGCTACGAACTGCGGATTTGGACTTTGGGGCCAGAAAGGAGGCCGTTGATTGGATTGAAAAGGTTCGAGAGCACTTCGGTTTCAGCCCCCTCTGTACATATCTATCCATAAACTATCTGGACCGTTTCCTTTCATCATACGAATTACCAAAGGGAAAAGGCTGGACAATGCAATTGTTGGCCGTGGCATGCCTGTCTCTCGCTGCCAAAATGGAAGAGGCTGAAGTTCCCCTGTCTGTTGATTTGCAGGTGGGAGGATCAAAGTTCGTATTTGAAGCAAGAACAATACAAAGAATGGAACTTTTGGTACTGAGCACACTGAGGTGGAGAATGCAGGCCATCACTCCGTTTTCCTTCATAGACTATTTTCTATTCAAGCTGAATGATGATCAGAAACCAGAAGGAAGTTCCATATCGCGATCCATCCAAATCATATCGAGCACAGCGAGAGGGGTTGACTTATTGGAATTCAGGCCCTCGGAAGTTGCAGCGGCAGTGGCAATATGTGTTGTAAGGGAAACCCAAACGGTGAATACGGAGAAAGCAATTTCGGTGCTGAGTCAACATGTTGAAAAGGAGAGAGTGGTGGAGTGCTTGAAGATAATAAAGGAGATGGCATCAAACGGAAGAGAAGACTGCGTGGCGCAGAGCCCAATTGGGGTGTGGGAGGCGGCCGCATTATGCTGGAGCCATAAAAGCGAAGGATCAAGTTCATGTGGGAGTTCGTCTTCGTCACGTGATGGCCCCGATCCTAAAAGGATCAAGTTAAACAATACAAGTAACAGTGGAGTAGAGCTGTTGTAG 1038 0.4817 MAPSFDCVSALLCAEDDSIFDDGDYGATMEPLDVTRGPRNHNLCFHDRHDGLPLQSDECLAQMVQKECDHLPAGDYLNRLRTADLDFGARKEAVDWIEKVREHFGFSPLCTYLSINYLDRFLSSYELPKGKGWTMQLLAVACLSLAAKMEEAEVPLSVDLQVGGSKFVFEARTIQRMELLVLSTLRWRMQAITPFSFIDYFLFKLNDDQKPEGSSISRSIQIISSTARGVDLLEFRPSEVAAAVAICVVRETQTVNTEKAISVLSQHVEKERVVECLKIIKEMASNGREDCVAQSPIGVWEAAALCWSHKSEGSSSCGSSSSSRDGPDPKRIKLNNTSNSGVELL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3561g00001 345 Gene3D - 73 190 - -
Pral3561g00001 345 CDD CYCLIN_AtCycD-like_rpt1 89 187 - -
Pral3561g00001 345 PANTHER CYCLINS 58 284 IPR039361 -
Pral3561g00001 345 Pfam Cyclin, C-terminal domain 192 286 IPR004367 -
Pral3561g00001 345 SMART cyclin_7 95 183 IPR013763 -
Pral3561g00001 345 MobiDBLite consensus disorder prediction 312 345 - -
Pral3561g00001 345 FunFam D6-type cyclin 187 278 - -
Pral3561g00001 345 FunFam D2/4-type cyclin 73 186 - -
Pral3561g00001 345 SMART Cyclin_C_2 192 321 IPR004367 -
Pral3561g00001 345 Pfam Cyclin, N-terminal domain 60 189 IPR006671 -
Pral3561g00001 345 Gene3D - 60 278 - -
Pral3561g00001 345 SUPERFAMILY Cyclin-like 53 189 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3561g00001 Pral-Chr3561 2492 4626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3561g00001 55 260 Core Cell Cycle Gene Families AT5G65420 58.173 7.16e-83 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3561g00001 K18810 - gmx:100803873 424.861