Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3558g00001 ATGTTGATGGCCTTGGAGCAGCAATTATCACTGGGTCCGAATCCCAATCCGGTTGACGCCGAAAGAGACGGAACCACTAACGGCGTCGACGTCAGGCCGCCGTCCACCGAAGGCGGAGAAGATGGGGTCAAAGCGCCGAGGCTGCCGCGCTGGACGAGACAAGAGATTCTGGTGCTGATACATGGGAAAGGGGACGCGGAGAACCAAATTCGAGGCAGTCGTAGTGCGGGTTTGCCATTCGGGACGGGTCAGCTGGAGCCGAAATGGGCTTCGGTCTCATCGTACTGCAAAAAGCATGGAGTGAATAGAGGTCCGGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCCGGAGACTATAAGAAGATCAAAGAATGGGAATCTCAGATAAGGGACGATTCGGAATCTTTCTGGGTGATGAGAAACGATTTAAGGAGAGAGAGAAAATTGCCGGGATTTTTCGATAAGGAGGTCTATGACATTCTCGATTCGGGATCGCAGGTGCCGGCGTTATCTTTGGCTCTGGCACCGGCTCCCGCGACAGGAACTGTTCCGGTGGAAAAGGGAAAACACAGCAGGGGAGTGGCGGCGGAGGAAGCGGAGGCTGATACAGAGCCACACTTGTATGATAGTCGGAGCGCCGCCGGAGAGGATGGTTTATTCTCGGATTTCGAACAGGAAGAGGCAGGAGTGAGTCCAGAAAAGGAAGCAGCGAGGAAGGATGTCTCAACACATACGACGACTGTTCCTGCACCTATTCCCATCTCAGAGAAGCAATATCAACCACTTCTGCGTGGCTGTCAAGGTGCAGGAAATGCTCAAGGTGGGAGCAACGAGAAACAGCGAGGCCCAAATCCGGAAATGGGTTCTACGTCTCAAGGAGGACGGAAGAGGAAGCGATTTCCACCAACAGATGAGGAGGATGAACTTCTGCAAAATCAATTGATTAATGTGTTGGAAAGAAACGGGAAGATGCTGAGCGCCCAGCTTGAAGCTCAGAACATAAATTTCCAGTTGGATAGAGAGCAGCGGAAAGACCATGCTAGTCACTTAGTTGCTGTTCTTGATAAGCTTGCAGATGCTCTAGGCAGAATTGCTGATAAATTATAG 1107 0.5167 MLMALEQQLSLGPNPNPVDAERDGTTNGVDVRPPSTEGGEDGVKAPRLPRWTRQEILVLIHGKGDAENQIRGSRSAGLPFGTGQLEPKWASVSSYCKKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIRDDSESFWVMRNDLRRERKLPGFFDKEVYDILDSGSQVPALSLALAPAPATGTVPVEKGKHSRGVAAEEAEADTEPHLYDSRSAAGEDGLFSDFEQEEAGVSPEKEAARKDVSTHTTTVPAPIPISEKQYQPLLRGCQGAGNAQGGSNEKQRGPNPEMGSTSQGGRKRKRFPPTDEEDELLQNQLINVLERNGKMLSAQLEAQNINFQLDREQRKDHASHLVAVLDKLADALGRIADKL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3558g00001 368 Gene3D - 51 121 - -
Pral3558g00001 368 MobiDBLite consensus disorder prediction 270 291 - -
Pral3558g00001 368 MobiDBLite consensus disorder prediction 1 47 - -
Pral3558g00001 368 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 25 368 - -
Pral3558g00001 368 MobiDBLite consensus disorder prediction 190 211 - -
Pral3558g00001 368 Pfam Myb/SANT-like DNA-binding domain 50 139 IPR044822 -
Pral3558g00001 368 ProSiteProfiles Myb-like domain profile. 50 116 IPR001005 -
Pral3558g00001 368 MobiDBLite consensus disorder prediction 227 241 - -
Pral3558g00001 368 MobiDBLite consensus disorder prediction 179 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3558g00001 Pral-Chr3558 116087 119602 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3558g00001 23 207 Trihelix Transcription Factor Family AT3G25990 25.381 1.14e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral3558g00001 Myb_DNA-bind_4 4.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3558g00001 - - pcin:129308058 655.981