Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral354g00001 ATGTTTAACTTGGTTCTCTTGCCAATCTCTACTTTCAATAATTTCATATTCTATGTGGTTCTCTTCTGTGCTTGCCTCTTTTCTGTTGCTCTTGCGACTGATCATCCATCTTCCTGGTGGGATGAAAAGATGCCTGTACTGGCCACTATTTCCTTCGTTGGTGGATTCGTAATTACAAGCGTACTTGTCATTATATTTGCAGCTATTATTCGACATAGCAAAATATTGAGACAAGTTCTGATTAGGAAAATAATAAAAGGACGAGAAAAAAAGCAGGGGAAGAAGCATGGCGATTTCACTTCAATGTGGAATTTTGATGGCCATATTGCATTTGAAGATATCATTAAAGCTACCGACGATTTCGATATCAAATACTGCATTGGAAGAGGAGCTTCTGGGGAGGTTTACAAGGAAAAACTTCCTTGTGGAAAAATTGTTGCAGTGAAGAAACTTCGCTATATGCAATCGGAAAATCTGTCATTTCATAAAAGCTTTTACAATGAGATTGAGATTTTGACAGAGATTCGTCATCGAAACATTGTTAAGTTGCATGGCTTTTGTTTGAATATACAGTGCATGTTTCTGGTGTATGGATTTATGGAATGTGGTAGCCTCTTACATGTTTTGAGAAATGAAGAAAAGGCTCAGAAGTTAACATGGAACAAGAGGCTCAATATTATTAATGGGATTGCTCATGCTGTTAGTTATATGCATCACGATTGTGTCCCTCCAATTATTCATCGAGACATAACAAGTGGTAATATCTTGTTAAACTCAGATATGGAAGCATTTGTCTCAGACTTTGGCACGGCTGGGACCCTTCATCCATATTCATCGAATCTAAGTCTTCTAGTTGGGACTTATGGCTATGTTGCTCCAGAGTTAGCATATGCAATATCAGCAACCCAAAAGAGTGATGTTTACAGCTTTGGAGTTGTTGCATTAGAAACTATGATGGGAAAGCATTCAGGAGAGTTAATTTCATGTTTAACAAAGGATTATACAGATCAAAAGATAATGCTAAGAGATATCTTAGACGCACGACTCCCTCAACCTCGCACTCGAAAAGAAATTTGGGATGTAATTCTTGTGATGACCATTGCCTTAGCATGCGTTTGTGCTGAACCAAATTGTAGGCCATCAATGAAGCAAGTGACTCAGAAACTTTCACTTTCTAGGCCACTTTTTACAGTTCCATTCAATGATATTTCAATTCACCAGTTGATGAGTCAAGACATAATTTCATGTAATTGA 1254 0.3756 MFNLVLLPISTFNNFIFYVVLFCACLFSVALATDHPSSWWDEKMPVLATISFVGGFVITSVLVIIFAAIIRHSKILRQVLIRKIIKGREKKQGKKHGDFTSMWNFDGHIAFEDIIKATDDFDIKYCIGRGASGEVYKEKLPCGKIVAVKKLRYMQSENLSFHKSFYNEIEILTEIRHRNIVKLHGFCLNIQCMFLVYGFMECGSLLHVLRNEEKAQKLTWNKRLNIINGIAHAVSYMHHDCVPPIIHRDITSGNILLNSDMEAFVSDFGTAGTLHPYSSNLSLLVGTYGYVAPELAYAISATQKSDVYSFGVVALETMMGKHSGELISCLTKDYTDQKIMLRDILDARLPQPRTRKEIWDVILVMTIALACVCAEPNCRPSMKQVTQKLSLSRPLFTVPFNDISIHQLMSQDIISCN 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral354g00001 417 PANTHER LEUCINE RICH REPEAT KINASE 2 52 392 - -
Pral354g00001 417 FunFam Leucine-rich repeat receptor protein kinase MSP1 85 199 - -
Pral354g00001 417 ProSitePatterns Tyrosine protein kinases specific active-site signature. 245 257 IPR008266 GO:0004672|GO:0006468
Pral354g00001 417 Pfam Protein kinase domain 125 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral354g00001 417 ProSiteProfiles Protein kinase domain profile. 121 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral354g00001 417 FunFam Leucine-rich repeat receptor-like protein kinase 200 396 - -
Pral354g00001 417 Gene3D Transferase(Phosphotransferase) domain 1 200 395 - -
Pral354g00001 417 Gene3D Phosphorylase Kinase; domain 1 83 199 - -
Pral354g00001 417 SUPERFAMILY Protein kinase-like (PK-like) 103 389 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral354g00001 Pral-Chr354 7679 9811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral354g00001 41 293 Receptor kinase-like Gene Family AT4G08850 48.047 3.90e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral354g00001 Pkinase 2.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral354g00001 - - pcin:129289446 553.132