Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3543g00016 ATGATGTATTTTTACAGAGGATATACCGCACCAGAATATGTAGTTTATGGTCAATTATCAGAAAAAGTTGATATTTATAGCTACGGTGTTGTCATCCTAGAAATTATCAGTGGTGAAAAATGCAATAAATTGCAGATCCATGGTGATTTTGAAGGTGAATATCTCCTTAAAAAAGCTTGGAAACTATATGAGAGAGGCATACACATAGAGTTGGTGGATGATACCTTGGATCCTAATGATTATAATGCAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACCCAAGCATCTGCTGAATTAAGGCCATCAATGTCTGAAGTAATTGTTTTGCTTCAAGGCAATGACTTACTAGAGAATATGATGAAACCCGCTATGCCTATCATGATTGAAACTTAA 405 0.3506 MMYFYRGYTAPEYVVYGQLSEKVDIYSYGVVILEIISGEKCNKLQIHGDFEGEYLLKKAWKLYERGIHIELVDDTLDPNDYNAEEVKKIIEIGLLCTQASAELRPSMSEVIVLLQGNDLLENMMKPAMPIMIET 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3543g00016 134 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00016 134 SUPERFAMILY Protein kinase-like (PK-like) 6 119 IPR011009 -
Pral3543g00016 134 Gene3D Transferase(Phosphotransferase) domain 1 2 126 - -
Pral3543g00016 134 Pfam Protein tyrosine and serine/threonine kinase 8 112 IPR001245 GO:0004672|GO:0006468
Pral3543g00016 134 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 7 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3543g00016 Pral-Chr3543 123668 124313 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3543g00016 7 117 Receptor kinase-like Gene Family AT1G56120 50.000 1.83e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3543g00016 PK_Tyr_Ser-Thr 2.7e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3543g00016 - - pcin:129300003 196.438