LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3543g00012	ATGCTTCAGCGCCCTAATCTCCTTAACTTATTTATCTCCATATTCTGGGCATGCTGGGTTTTTTACGGCGTCGTTTCGGACCCGCAGACCAATCTTCTGATGATAGGGTGCAGCCCACCCAACCAGTTCGTCGTGTCGGACTACACCATCTTCAATGACAATCTGAACTTAACGCTGCAAGAAATCAGGGAGCAAATCAGTGACCCAAACAAGCACTTCGCCACCGCACGGGAAGGCAATGGAGGAAACCCTGTTTCCACTCTTTTGCAATGCAGAAACTATCTCTCCGTTGCTGACTGTGTCAGGTGCTTAGACGTCGCCGCCGCACAAATCCGCAGCTGCTCCACCGGTTCCTACGGTGGCCATGTCGTCTACGATGGCTGCTTCCTCAGGTACGAGGCTGGTGATTTCTACGGGGAGACGAAAGGATCTTTGACTAAAGTATTGTGTGGCAATCAAAATGCCAGAGAAGTCATTCCCTTCACTGCAACTGCTCAAAATTTGCTCATGAATCTCCAAACAGCAACACCCAAAATTCCAGGTTTCTCTGCAGCCACAAAAATACAAGTGCCCACTAATGGTGAAACTATTTATGCTTTTGCCCAATGTGTTGGTACTGTGACACAAAGTGGGTGTCTAGATTGCTTAAAGGCTGCGTATAGCAATATGCAGATTTGTCTTTCCAATTCAGAGGGTAGGGCTTTTGATGCTGGGTGTTTCATCAGATACTCCACCACTTCCTTCTTTGCTGATAATGAGACTATTGATATCACACCCTTGGTTAAACCAGGTTCATCAAGCAATAAGGCGACAATTATTGGCGGAGTTGTTGGGGTTCTAGCACTTGTTTTGGTCCTTCTTGCATTATTTGCTTGGACTAGGCGATCACAAAGCCCCAGGAGAGTTCCCAGAGGAGATAAAACTGAAACAAGTAAGTTGGAAGGCCCAATAACTTATAGTTATCAGGATTTGAGGTCTGCAACAAAAAATTTCAGTGATGAAAATAAACTAGGAGAAGGAGGATTTGGTATAGTATATAAGGGAACTCTAAGGAATGGAAAAATAGTTGCCGTTAAGAAATTAACCACTCAACACTTGAGTAGGATGGATGAAGATTTTGAAAGTGAAGCGAAGCTTATAAATAATGTTCATCATCGAAATCTTGTTCGTCTTTTGGGATGTTGCAGTAAAGGCCAAGACAGATTCCTTGTTTATGAATACATGAAAAACAATAGTCTCGACAAGTTCTTATTTGCTAAAACGAAAGGTTCTCTCAGCTGGAAACAACGATATGATATAATTTTAGGAACAGCAAGGGGATTAACTTATCTACATGAGGAATTTCATATTTGTATCATACATAGAGACGTAAAGACTAACAACATCCTCCTAGATGGTGATATGCAACCTAGAATTGCTGATTTTGGATTGGCAAGGTTTTTACCAGAGGACAAATCTCACCTCAGCACAAATTTTGCAGGAACATTGCGTGGAAACTATATGAGAGAGGCATGCACTTAG	1521	0.4267	MLQRPNLLNLFISIFWACWVFYGVVSDPQTNLLMIGCSPPNQFVVSDYTIFNDNLNLTLQEIREQISDPNKHFATAREGNGGNPVSTLLQCRNYLSVADCVRCLDVAAAQIRSCSTGSYGGHVVYDGCFLRYEAGDFYGETKGSLTKVLCGNQNAREVIPFTATAQNLLMNLQTATPKIPGFSAATKIQVPTNGETIYAFAQCVGTVTQSGCLDCLKAAYSNMQICLSNSEGRAFDAGCFIRYSTTSFFADNETIDITPLVKPGSSSNKATIIGGVVGVLALVLVLLALFAWTRRSQSPRRVPRGDKTETSKLEGPITYSYQDLRSATKNFSDENKLGEGGFGIVYKGTLRNGKIVAVKKLTTQHLSRMDEDFESEAKLINNVHHRNLVRLLGCCSKGQDRFLVYEYMKNNSLDKFLFAKTKGSLSWKQRYDIILGTARGLTYLHEEFHICIIHRDVKTNNILLDGDMQPRIADFGLARFLPEDKSHLSTNFAGTLRGNYMREACT	506

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3543g00012	506	Pfam	Protein kinase domain	332	496	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3543g00012	506	FunFam	Os07g0541700 protein	408	495	-	-
	Pral3543g00012	506	ProSiteProfiles	Protein kinase domain profile.	331	506	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3543g00012	506	FunFam	Cysteine-rich receptor-like protein kinase 2	145	248	-	-
	Pral3543g00012	506	ProSiteProfiles	Gnk2-homologous domain profile.	143	248	IPR002902	-
	Pral3543g00012	506	Pfam	Salt stress response/antifungal	153	245	IPR002902	-
	Pral3543g00012	506	Pfam	Salt stress response/antifungal	46	133	IPR002902	-
	Pral3543g00012	506	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	452	464	IPR008271	GO:0004672\|GO:0006468
	Pral3543g00012	506	Gene3D	Phosphorylase Kinase; domain 1	303	407	-	-
	Pral3543g00012	506	Gene3D	Transferase(Phosphotransferase) domain 1	408	502	-	-
	Pral3543g00012	506	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	89	496	-	-
	Pral3543g00012	506	SMART	serkin_6	331	506	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3543g00012	506	ProSiteProfiles	Gnk2-homologous domain profile.	30	137	IPR002902	-
	Pral3543g00012	506	Gene3D	-	142	248	IPR038408	-
	Pral3543g00012	506	Gene3D	-	31	137	IPR038408	-
	Pral3543g00012	506	SUPERFAMILY	Protein kinase-like (PK-like)	312	496	IPR011009	-
	Pral3543g00012	506	ProSitePatterns	Protein kinases ATP-binding region signature.	337	360	IPR017441	GO:0005524
	Pral3543g00012	506	FunFam	Cysteine-rich receptor-like protein kinase 2	294	407	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3543g00012	Pral-Chr3543	90791	95379	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3543g00012	71	496	Receptor kinase-like Gene Family	AT1G70530	39.545	4.44e-91	285

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pral3543g00012		Pkinase	1.8e-37	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3543g00012	-		-	gmx:100811953	622.854