Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3543g00011 ATGCTTCAGCGCCCTAATCTCCTTAACTTATTTATCTCCATATTCTGGGCATGCTGGGTTTTTTACGGCGTCGTTTCGGACCCGCAGACCAATCTTCTGATGATAGGGTGCAGCCCACCCAACCAGTTCGTCGTGTCGGACTACACCATCTTCAATGACAATCTGAACTTAACGCTGCAAGAAATCAGGGAGCAAATCAGTGACCCAAACAAGCACTTCGCCACCGCACGGGAAGGCAATGGAGGAAACCCTGTTTCCACTCTTTTGCAATGCAGAAACTATCTCTCCGTTGCTGACTGTGTCAGGTGCTTAGACGTCGCCGCCGCACAAATCCGCAGCTGCTCCACCGGTTCCTACGGTGGCCATGTCGTCTACGATGGCTGCTTCCTCAGGTACGAGGCTGGTGATTTCTACGGGGAGACGAAAGGATCTTTGACTAAAGTATTGTGTGGCAATCAAAATGCCAGAGAAGTCATTCCCTTCACTGCAACTGCTCAAAATTTGCTCATGAATCTCCAAACAGCAACACCCAAAATTCCAGGTTTCTCTGCAGCCACAAAAATACAAGTGCCCACTAATGGTGAAACTATTTATGCTTTTGCCCAATGTGTTGGTACTGTGACACAAAGTGGGTGTCTAGATTGCTTAAAGGCTGCGTATAGCAATATGCAGATTTGTCTTTCCAATTCAGAGGGTAGGGCTTTTGATGCTGGGTGTTTCATCAGATACTCCACCACTTCCTTCTTTGCTGATAATGAGACTATTGATATCACACCCTTGGTTAAACCAGGTTCATCAAGCAATAAGGCGACAATTATTGGCGGAGTTGTTGGGGTTCTAGCACTTGTTTTGGTCCTTCTTGCATTATTTGCTTGGACTAGGCGATCACAAAGCCCCAGGAGAGTTCCCAGAGGAGATAAAACTGAAACAAGTAAGTTGGAAGGCCCAATAACTTATAGTTATCAGGATTTGAGGTCTGCAACAAAAAATTTCAGTGATGAAAATAAACTAGGAGAAGGAGGATTTGGTATAGTATATAAGGGAACTCTAAGGAATGGAAAAATAGTTGCCGTTAAGAAATTAACCACTCAACACTTGAGTAGGATGGATGAAGATTTTGAAAGTGAAGCGAAGCTTATAAATAATGTTCATCATCGAAATCTTGTTCGTCTTTTGGGATGTTGCAGTAAAGGCCAAGACAGATTCCTTGTTTATGAATACATGAAAAACAATAGTCTCGACAAGTTCTTATTTGCTAAAACGAAAGGTTCTCTCAGCTGGAAACAACGATATGATATAATTTTAGGAACAGCAAGGGGATTAACTTATCTACATGAGGAATTTCATATTTGTATCATACATAGAGACGTAAAGACTAACAACATCCTCCTAGATGGTGATATGCAACCTAGAATTGCTGATTTTGGATTGGCAAGGTTTTTACCAGAGGACAAATCTCACCTCAGCACAAATTTTGCAGGAACATTAGGTTATACAGCACCTGAGTATGTAATACATGGCCAATTATCAGAGAAAGTTGATATATATAGCTACGGTGTTGTAGTGTTGGAAATTATAAGTGGTAGAAAAAGTGAAGAATTAAGAGTTGATGGTGATGCAGAGGGCGAATTCCTCCTTAAGAAGGCGTGGAAACTATATGAGAGAGGCATGCACTTAGAGTTGGTGGATAGTGCCTTAGACTCTAATGAGTATGATGCAGAAGAAGTGAAGAAAATCATAGAAATTGGTTTACTTTGCACTCAAGCGTCTCCTGCAATAAGGCCAACAATGTCTGAAGTTGTTGTTTTGTTGCAAAACAAGGGCTTATTAGAGAACATAAGACCAACTATGCCTATCTTGATCGAAACCAACTAA 1875 0.4171 MLQRPNLLNLFISIFWACWVFYGVVSDPQTNLLMIGCSPPNQFVVSDYTIFNDNLNLTLQEIREQISDPNKHFATAREGNGGNPVSTLLQCRNYLSVADCVRCLDVAAAQIRSCSTGSYGGHVVYDGCFLRYEAGDFYGETKGSLTKVLCGNQNAREVIPFTATAQNLLMNLQTATPKIPGFSAATKIQVPTNGETIYAFAQCVGTVTQSGCLDCLKAAYSNMQICLSNSEGRAFDAGCFIRYSTTSFFADNETIDITPLVKPGSSSNKATIIGGVVGVLALVLVLLALFAWTRRSQSPRRVPRGDKTETSKLEGPITYSYQDLRSATKNFSDENKLGEGGFGIVYKGTLRNGKIVAVKKLTTQHLSRMDEDFESEAKLINNVHHRNLVRLLGCCSKGQDRFLVYEYMKNNSLDKFLFAKTKGSLSWKQRYDIILGTARGLTYLHEEFHICIIHRDVKTNNILLDGDMQPRIADFGLARFLPEDKSHLSTNFAGTLGYTAPEYVIHGQLSEKVDIYSYGVVVLEIISGRKSEELRVDGDAEGEFLLKKAWKLYERGMHLELVDSALDSNEYDAEEVKKIIEIGLLCTQASPAIRPTMSEVVVLLQNKGLLENIRPTMPILIETN 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3543g00011 624 Pfam Salt stress response/antifungal 46 133 IPR002902 -
Pral3543g00011 624 Pfam Salt stress response/antifungal 153 245 IPR002902 -
Pral3543g00011 624 FunFam Cysteine-rich receptor-like protein kinase 2 408 612 - -
Pral3543g00011 624 SMART serkin_6 331 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00011 624 Gene3D Transferase(Phosphotransferase) domain 1 408 612 - -
Pral3543g00011 624 Pfam Protein kinase domain 332 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00011 624 Gene3D - 31 137 IPR038408 -
Pral3543g00011 624 Gene3D - 142 248 IPR038408 -
Pral3543g00011 624 CDD STKc_IRAK 337 606 - -
Pral3543g00011 624 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Pral3543g00011 624 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 621 - -
Pral3543g00011 624 FunFam Cysteine-rich receptor-like protein kinase 2 294 407 - -
Pral3543g00011 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Pral3543g00011 624 ProSiteProfiles Protein kinase domain profile. 331 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00011 624 ProSiteProfiles Gnk2-homologous domain profile. 30 137 IPR002902 -
Pral3543g00011 624 FunFam Cysteine-rich receptor-like protein kinase 2 145 248 - -
Pral3543g00011 624 SUPERFAMILY Protein kinase-like (PK-like) 312 604 IPR011009 -
Pral3543g00011 624 ProSitePatterns Protein kinases ATP-binding region signature. 337 360 IPR017441 GO:0005524
Pral3543g00011 624 Gene3D Phosphorylase Kinase; domain 1 303 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3543g00011 Pral-Chr3543 90503 95380 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3543g00011 24 607 Receptor kinase-like Gene Family AT1G70520 37.416 1.65e-123 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3543g00011 Pkinase 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3543g00011 - - gmx:100813585 797.734