Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3543g00009 ATGTTGCTGCACCTGCAACAAAAGCCCCAGTTCGTCTGCTTTTACTTAAGTTTGATGATTTGGTCATGGTCATGGTGGAGTCTTGACGGCGTCGTTTCGGACCCACAGACCAACTTCGTAAAACTAGGGTGCACCCAGTACAACGTGAGTGACTTGTCCATCTTCAGTGACAACTTAAACATAACTCTGAGAGACCTGAGAGCTCAAATCAGCAACCAGAGCAAGCACTTCGCGACGGCGCAGGCCGTGAAGGGTAACAATCCGGCGTACGGCCTTTTCCAGTGCAGAAACTGCCTCTCCATCAAAGATTGCCTCGCTTGCTTCGACTTCGCCGCCGTTCATATACGAAACTGCTCTGTCGGCGTCGCCGGTGCCCGTATCATCTACGAAGGTTGCTTCCTCAGGTATGAGAGCAGTGGATTCTTCGATCAGAACACAGATGCTGGGAACAACATAATCTGTGGGAATCAGACGATCAGAAACACCACAGGACTTTCTTCAACTGTGCAACAAGTTCTAACGAATCTGGACATAGCAGCCCCAAGAATCAGTGGTTTTTATGCAGCCACTAAGACGCCTGTGCCTAACAGTAATGGCTCAAACATTTATGCCATTGCTCAATGTATTGAAACTCTCACACAAGTTGGCTGCCAGGATTGCCTCAACATTGCCTTAAGAAATTTCCAGATCTGTCTTCCCAACTCAAATGCTAAGACTTATGATGCTGGTTGTTTCATGAGATACTCCACCACAGCCTTCTTTGCTGATAATCAAACCATTAATATTAATCCCTTCTTGAAAGAAGGGGGAGGTTCAAGGAAGAAAGAGGCCATTATCGGGGGAGGGGTTGGAGGTGGATCTTTTCTTTTGATTCTCCTCGCATTATTTGCTTTGTACAGACGATTGAAGTCGTCCAAGAGGATTCATAGAGGAGACATATATGGAGTAAGTAAGTGGAAAGGCCTGATTAATTTTAGCTATAGGGAGTTGAAGTTTGCCACTAAAGGTTTCAGTGCAAAAAATAAGCTTGGAGAAGGAGGATTTGGTGCTGTATATAAGGGCACTTTGAAGAATGGGAAAATAGTTGCTGTAAAGAAATTAACTTTACGCCAGTCTAAGAAGGTGGAGGAAGAATTTGAAAGTGAAGTGAAGCTTATAAACAATGTTCATCATCGAAATCTTATTCGGCTTCTTGGGTGTTGCAGTCAAGGCAATGAGAGAATTCTTATTTATGAATATATGAAAAACACCAGTCTTGACAAATTCTTATTTGGTAAAAACAGAGGTTCTCTTAATTGGAAGCAGCGGTATGATATAATTTTAGGAACAGCAAGGGGTTTGGCTTATCTACATGAAGAATTTCATGTTCGTATCATACATAGAGATATAAAAACCAATAATATTCTCTTAGATGATGATCTCCAACCAAGAATTGCTGATTTTGGTTTAGCAAGGCTTCTACCTGAGGAGAAAACTCATCTTAGCACAAAATTTGCAGGAACATTAGGATACACGGCCCCAGAATATGCAATCCATGGTCAATTATCAGAAAAGGCTGATATTTATAGCTATGGCGTTGTAGTCTTAGAAGTTATGAGTGGTGAACGAAGCAATGAATTGAATTTTGAAGGCGAATTCCTCATTCGAAAAGCTTGGAAGCTATATGAGAGAGGCATACACATAGAGTTGGTGGATGATACCTTGGATCCTAGTGATTATAATGCAGAAGAAGTGAAGAAAATCATAGAAATTGGTCTACTTTGCACCCAAGCATCTGCAGAATTAAGGCCATCAATGTCTGAAGTAATTGTTTTGCTCCAAGGCAATGACTTATTAGAGAATATGATGAAACCCACCATGCCTATCTTGATTGAAACTTAA 1881 0.4163 MLLHLQQKPQFVCFYLSLMIWSWSWWSLDGVVSDPQTNFVKLGCTQYNVSDLSIFSDNLNITLRDLRAQISNQSKHFATAQAVKGNNPAYGLFQCRNCLSIKDCLACFDFAAVHIRNCSVGVAGARIIYEGCFLRYESSGFFDQNTDAGNNIICGNQTIRNTTGLSSTVQQVLTNLDIAAPRISGFYAATKTPVPNSNGSNIYAIAQCIETLTQVGCQDCLNIALRNFQICLPNSNAKTYDAGCFMRYSTTAFFADNQTININPFLKEGGGSRKKEAIIGGGVGGGSFLLILLALFALYRRLKSSKRIHRGDIYGVSKWKGLINFSYRELKFATKGFSAKNKLGEGGFGAVYKGTLKNGKIVAVKKLTLRQSKKVEEEFESEVKLINNVHHRNLIRLLGCCSQGNERILIYEYMKNTSLDKFLFGKNRGSLNWKQRYDIILGTARGLAYLHEEFHVRIIHRDIKTNNILLDDDLQPRIADFGLARLLPEEKTHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEVMSGERSNELNFEGEFLIRKAWKLYERGIHIELVDDTLDPSDYNAEEVKKIIEIGLLCTQASAELRPSMSEVIVLLQGNDLLENMMKPTMPILIET 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3543g00009 626 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 621 - -
Pral3543g00009 626 FunFam Cysteine-rich receptor-like protein kinase 2 414 614 - -
Pral3543g00009 626 Pfam Protein kinase domain 338 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00009 626 Gene3D Transferase(Phosphotransferase) domain 1 414 617 - -
Pral3543g00009 626 Gene3D - 36 141 IPR038408 -
Pral3543g00009 626 Gene3D - 149 253 IPR038408 -
Pral3543g00009 626 ProSitePatterns Protein kinases ATP-binding region signature. 343 366 IPR017441 GO:0005524
Pral3543g00009 626 FunFam Cysteine-rich receptor-like protein kinase 2 305 413 - -
Pral3543g00009 626 ProSiteProfiles Protein kinase domain profile. 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00009 626 Gene3D Phosphorylase Kinase; domain 1 314 413 - -
Pral3543g00009 626 SMART serkin_6 337 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00009 626 FunFam Cysteine-rich receptor-like protein kinase 2 149 253 - -
Pral3543g00009 626 Pfam Salt stress response/antifungal 47 138 IPR002902 -
Pral3543g00009 626 Pfam Salt stress response/antifungal 160 250 IPR002902 -
Pral3543g00009 626 SUPERFAMILY Protein kinase-like (PK-like) 319 606 IPR011009 -
Pral3543g00009 626 ProSiteProfiles Gnk2-homologous domain profile. 147 253 IPR002902 -
Pral3543g00009 626 CDD STKc_IRAK 343 608 - -
Pral3543g00009 626 ProSiteProfiles Gnk2-homologous domain profile. 37 141 IPR002902 -
Pral3543g00009 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3543g00009 Pral-Chr3543 37413 127970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3543g00009 27 625 Receptor kinase-like Gene Family AT1G70520 36.885 1.97e-123 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3543g00009 Pkinase 8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3543g00009 - - gmx:100813585 820.846