Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3543g00008 ATGCTTCGCCCTAATCTTCCTTTTCCTTTAATCATCACCTTCATCTTCTGCTCATGCTCGATTCTTGATGGCGTCGTTTCAGACCCACAGGCCAATCTTTTGACCAGAGGATGCAACCCGTACTACGAATTTCTGGTGCCCAACGTCACCATCTTCGGTGAAAATATAAACGCGACGTTGCGAGATATCAGAGAGCAGATCAGTGACCAAAACAAGCACTTCGTCACAGCACAGCAAGCTGCCAATGGTGGAAACACCGTCTCTACACTTTTTCAATGTAGAAGCTATCTCTCCACCGCCGACTGTGTCGCCTGCTTCGACATGGCAGCCACTGACATCCTCAGCTGTGCTGCCGGTGACCCTGGTGGCCGGGTTGTTTACGACGGCTGCTTCCTCAGGTACGACATTAGTAGCGCGTTCTTTGGTGATACAACACAGTCTATCAACAGTGCATCATGTGGGAATCAGACTACAACAGATGAACCTGCTTCTGCAGTTACCTCAGCTGTTCAACAAATTCTGATGAATCTCCAAACAGCAACCCCCACAATCACTGGCTTCTCTGCTGCCACAAGGACGCAACTTCCTAATAATGGTTCAATTATTTATGCATTTGCTCAGTGTATTGAGACTATCGCACAAAGTAAGTGCGAGGATTGCTTGGATGCTCAGTACAATAATATGCAGACTTGTCTTCCCAGTTCAGATGGTAGGGCTTATGCCAATGGCTGCTTCTTGAGATATTCCATCACTTCCTTCTTTCCTGATAATCAGACCATTGATATTGCACCCTCCTCCAAGCAGCAAGGTTCAAGAAATAATAAGGGAGCCATTATAGGTGGTGTTGTTGGAAGCGTAGTAGCTCTTGCTTTGATCTTTCTTGCATTATATGTTTGGATTAGACGAATAAACGAACCTAAGAGGGTTCCTAGAGGTGAGATAATTGGAGGAAGCAAGTTGAAAGGCCCAACTATTTATAATTATACGGTCTTGAAGACTGCAACCAAGAATTTCAGTGAAGAAAATAAGCTGGGAGAAGGAGGGTTTGGTGTTGTATATAAGGGCACTTTGAAGAATGGCAAAGGAATTGCAGTGAAGAAATTAACATTTCGCCAGTTCAACAAGATGGAGGAGGACTTTGAAAATGAAGTGAAGCTTATAAGTAATGTTCATCATCGAAATCTTGTTCGGCTCATTGGATATTGTACTCATGGCAAGAATAGGATCCTTGTTTATGAATACATGAAAAATAGCAGTCTTGACATTTTCTTATTTGGTAAAATGAAAGGCCGCCTCAACTGGAAGCAACGATATGATATAATTTTAGGCATCGCAAGGGGTCTAGTCTACCTACATGAGGAATTCCACATTTGTATCATACATAGAGATATAAAACCTAACAATGTTCTCTTGGATGATGATCTTCAGCCAAAAATTGCTGATTTTGGATTGGCAAGACTTCTACCAGAAGACAAGTCTCATCTTAGCACCAAATTTGCAGGAACATTGCTTGGAAGCTATATGGAAAAGGCATGCATGGGGAGCTAA 1548 0.4289 MLRPNLPFPLIITFIFCSCSILDGVVSDPQANLLTRGCNPYYEFLVPNVTIFGENINATLRDIREQISDQNKHFVTAQQAANGGNTVSTLFQCRSYLSTADCVACFDMAATDILSCAAGDPGGRVVYDGCFLRYDISSAFFGDTTQSINSASCGNQTTTDEPASAVTSAVQQILMNLQTATPTITGFSAATRTQLPNNGSIIYAFAQCIETIAQSKCEDCLDAQYNNMQTCLPSSDGRAYANGCFLRYSITSFFPDNQTIDIAPSSKQQGSRNNKGAIIGGVVGSVVALALIFLALYVWIRRINEPKRVPRGEIIGGSKLKGPTIYNYTVLKTATKNFSEENKLGEGGFGVVYKGTLKNGKGIAVKKLTFRQFNKMEEDFENEVKLISNVHHRNLVRLIGYCTHGKNRILVYEYMKNSSLDIFLFGKMKGRLNWKQRYDIILGIARGLVYLHEEFHICIIHRDIKPNNVLLDDDLQPKIADFGLARLLPEDKSHLSTKFAGTLLGSYMEKACMGS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3543g00008 515 Pfam Protein kinase domain 339 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00008 515 FunFam Os07g0541700 protein 415 502 - -
Pral3543g00008 515 SMART serkin_6 338 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00008 515 Gene3D - 31 138 IPR038408 -
Pral3543g00008 515 Gene3D - 145 253 IPR038408 -
Pral3543g00008 515 Pfam Salt stress response/antifungal 153 249 IPR002902 -
Pral3543g00008 515 Pfam Salt stress response/antifungal 50 135 IPR002902 -
Pral3543g00008 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Pral3543g00008 515 SUPERFAMILY Protein kinase-like (PK-like) 321 503 IPR011009 -
Pral3543g00008 515 ProSiteProfiles Protein kinase domain profile. 338 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00008 515 FunFam Cysteine-rich receptor-like protein kinase 2 148 253 - -
Pral3543g00008 515 FunFam Cysteine-rich receptor-like protein kinase 2 306 414 - -
Pral3543g00008 515 Gene3D Transferase(Phosphotransferase) domain 1 415 511 - -
Pral3543g00008 515 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Pral3543g00008 515 ProSiteProfiles Gnk2-homologous domain profile. 147 253 IPR002902 -
Pral3543g00008 515 ProSiteProfiles Gnk2-homologous domain profile. 31 139 IPR002902 -
Pral3543g00008 515 Gene3D Phosphorylase Kinase; domain 1 316 414 - -
Pral3543g00008 515 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 503 - -
Pral3543g00008 515 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3543g00008 Pral-Chr3543 28263 32771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3543g00008 77 503 Receptor kinase-like Gene Family AT5G40380 38.851 4.66e-87 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3543g00008 Pkinase 2.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3543g00008 - - pcin:129302578 598.971