Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3543g00005 ATGCTTCAAACTAATATCCTTCCCTTAATCACCTTCATCTTCTGGTCAAGGTGGACTCTTATTAACGTCGTCGTTTCAGACCCACAGGCCGATCTTCTAACCGATTTGTGCAACCCATCGGCCGAATTCCTCGTGACCAACGTCACCATCTTCGATGAAAACCTAAATGCAACGTTGCGAGGCATCAGAGAGCAGATCAGTGATCAAAACAAGCACTTCGCCACCGCACAGCAAGCTGCCAATGGTGGAAACACCGTCTCTACCCTTTTTCAATGTAGAAGCTATCTTTCCGTCGCCGACTGTGTCGCCTGCTTCGACGTGGCGGCCACTCAAATCCTCAGCTGTCCTGCCGGCGACCCTGGTGGCCGTGCTATCTACGACGGATGCTACCTCAGGTACGACATTAGTAGCGCTTTCTTTAGTGACACAGCAGAGCCTATCAATAGTGCATCATGTGGGAATCAGACTACAACAGAAGAACCTTCTACTGCATTTACCTCAGCTGTTCAACAAATTCTAATGAATCTCCAAACAGCAACTCCCAGAATAAGTGGCTTCTCTGCCGCCACAAAGACGCAACTTCCTAATAATGCTTCCACTATTTATGCATTCGCTCAGTGTATTGAAACCATCACTCAAAGTAAGTGTGAGAATTGCTTGAATTCCAACTACAATAGTATGCAGACTTGTCTTACCAATTCAGAGGGTAGGGCTTATGCCAATGGCTGTTTCTTGAGATATTCCACCACTCCCTTCTTTCCTCATAATCAGACCATTGATATCACACCCTCCTTCGAGCAGCAAGGTTCAAGCAATAAGGGAGCCATTGTAGGTGGTGTTGTTGGAAGCGTAGTAGTTCTTGCTTTGATCTTTGCAGTATATGTCCGGAGTAGACGACTGAAAAAAAGGTCCAGGAGGGTTCCTAGAGGTCAAATGAAAGGCTCGCTCAACTGGAAGCAACGATATGGTATCATTTTAGGCACAGCAAGAGGTCTAGCCTATTTACATGAGGAATTTCATGTTTGTGTCATACACAGAGATATAAAGCCTAATAACATTCTCTTGGATGATGACCTTCAACCTAAGATTGCTGATTTTGGATTGGCAAGATTTCTACCTGGGGACAAATCTCATCTTAGCACTAAATGTGCAGGAACATTGGGATACACAGCACCGGAGTATGTAATTTATGGCCAATTATCTGAAAAGGCTGATGTCTATAGTTATGGTGTAGCAATGTTAGAGATTATCAGTGGGCAAAAAAGTAAGGAACTAGCGATCAATGGTGATAATGAAGGGGAATACCTCCTCCAAAAGGCTTGGAAGCTATATGAAAGAGGTATACATGTGGAGCTAGTAGATGAGACCTTAGACCCTAATGATTATGATGTCGAAGAAGTGAAGAAAGTCATAGAGGTTAGTTTGCTTTGCACCCAAGCATCTGCTGAAATAAGGCCAACAATGTCCGAAGTTGTTGTCTTACTCCAAAACAAGGACTTGTTAGAGAATATGAAACCCACAATGCCTGTCTTGATTGAAACAAATTAA 1548 0.4373 MLQTNILPLITFIFWSRWTLINVVVSDPQADLLTDLCNPSAEFLVTNVTIFDENLNATLRGIREQISDQNKHFATAQQAANGGNTVSTLFQCRSYLSVADCVACFDVAATQILSCPAGDPGGRAIYDGCYLRYDISSAFFSDTAEPINSASCGNQTTTEEPSTAFTSAVQQILMNLQTATPRISGFSAATKTQLPNNASTIYAFAQCIETITQSKCENCLNSNYNSMQTCLTNSEGRAYANGCFLRYSTTPFFPHNQTIDITPSFEQQGSSNKGAIVGGVVGSVVVLALIFAVYVRSRRLKKRSRRVPRGQMKGSLNWKQRYGIILGTARGLAYLHEEFHVCVIHRDIKPNNILLDDDLQPKIADFGLARFLPGDKSHLSTKCAGTLGYTAPEYVIYGQLSEKADVYSYGVAMLEIISGQKSKELAINGDNEGEYLLQKAWKLYERGIHVELVDETLDPNDYDVEEVKKVIEVSLLCTQASAEIRPTMSEVVVLLQNKDLLENMKPTMPVLIETN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3543g00005 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 343 355 IPR008271 GO:0004672|GO:0006468
Pral3543g00005 515 Gene3D Transferase(Phosphotransferase) domain 1 300 507 - -
Pral3543g00005 515 FunFam Cysteine-rich receptor-like protein kinase 2 303 503 - -
Pral3543g00005 515 SMART serkin_6 202 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00005 515 ProSiteProfiles Protein kinase domain profile. 141 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00005 515 Pfam Protein kinase domain 312 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00005 515 Pfam Salt stress response/antifungal 152 249 IPR002902 -
Pral3543g00005 515 Pfam Salt stress response/antifungal 46 134 IPR002902 -
Pral3543g00005 515 SUPERFAMILY Protein kinase-like (PK-like) 313 495 IPR011009 -
Pral3543g00005 515 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 290 - -
Pral3543g00005 515 ProSiteProfiles Gnk2-homologous domain profile. 146 252 IPR002902 -
Pral3543g00005 515 FunFam Cysteine-rich receptor-like protein kinase 2 147 252 - -
Pral3543g00005 515 Gene3D - 30 137 IPR038408 -
Pral3543g00005 515 Gene3D - 146 252 IPR038408 -
Pral3543g00005 515 ProSiteProfiles Gnk2-homologous domain profile. 32 138 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3543g00005 Pral-Chr3543 19564 23960 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3543g00005 316 495 Receptor kinase-like Gene Family AT1G56120 52.222 4.78e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3543g00005 Pkinase 1.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3543g00005 - - pcin:129302578 601.668