Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3543g00003 ATGAAACTCTCATTCCTCCTTCTTCGTCGTTTCCAAACACCAATCAATACCTTGATATCATTTGCTCTATTAACCTCTTTTTCCTCCTCCTCCTACTCCTCCTTCTTCTTCCAAAACATGTTTCAACCTCATGTCCTTCCTTTAATCGCCTTCGTCTTCTGGTCATGGCGGATTCTTGACGGCGTCGTTTCGGATCCCCAGATCAATTTTTTGACCAGAGGGTGCAACCCATACAACGAATACCTAGTGGCTAACGTCTCCCTCTTTGAAGCAAACATAAACGCAACACTGCGAGACATCAGAGAGCAGATCAGTGGCCAAAACAAGCACTTCGCCACCGCACAGCAAGCTGCCAGTGGTGGAAACACCGTCTCTAGTCTTTTTCAATGCAGAAGCTATCTCTCCATGCCCGACTGCATCGCCTGCTTCGACGTCGCCGCCCCTCAAATCCTCAGCTGTGCTGCCGGCGAACCGGGTGGCCGTGTTGTCTACGACGGGTGCTACCTCAGGTACGACATTAGTGTCGCTTTCTTTGGAGCTACAACACAGTCTATCAATAGTGCATCGTGTGGGAATCAGACTATAACAGAAGAACCTGCTATTTCATTTACCTCAGCTGTTCAACAAATTCTAATGAATCTCCAAACAGCAACTCCCAGAATCACTGGCTTCTCTGTAGCTACCAAGGCACAAGTTCCTACTAATGGTCCAACTATTTATGCATTTGCTCAGTGCACAGAAACTATCACTCAGAGTGAGTGCCAGAACTGCTTGAATGTTCTGTACAACAATATGCAGAGTTGTCTTCCCAATTCAGAAGGTAGGGCTTTTGCTGATGGCTGTTTCTTGAGATATTCCACAACCTCCTTCTTTGCCGATAATCAGACTATTGATATCGCACCCTCCTTCAAGCAAGGTTCAAGCAATAATAAGGGAGCCATTATAGGAGGTGTTGTTGGAAGCGTAGTAGTTCTTGCTTTGATCTTTGTTGCATTGTATGTCTGGGTGGGACGACTAAAAAGGCCAACTAGGAGGGTTCCTGGAGGAGACGTTATTGGAGCAACCAAGTTGAAAGGCCCGGCTATTTATAATTATAACGACCTGAAGACTGCAACCAAGAACTTCAGCGAAGAGAATAAGCTAGGACAAGGAGGATTTGGTGTTGTGTATAAGGGCACTTTGAAGAATGGAAAAGAAATTGCAATCAAGAAATTAACATTTCGCCATTTCACGAGGATGGAGGAGGAATTTGAAAATGAAGTGAAGCTCATAAGCAACGTTCATCATCGGAATCTTGTTCGACTCCTGGGATATTGTATTTATGGCAAAACTAGAATTCTTGTTTATGAATACATGAAAAATAGCAGTCTTGACATATTCTTATTCGGTAAAATGCAAGGCTCACTCAATTGGAAGCAACGACATGATATAATTTTAGGCACTGCAAGGGGTCTCGCTTATTTGCATGAGGAATTCTATGTTTGTATCATACATAGAGATGTAAAGCCTAATAACATTCTCTTGGATGAGGATCTTCAACCTAAAATTGCTGATTTTGGGTTGGCAAGGCTTCTTCCTGAGGACAAAACTCATCTTAGCACCAACTTCGCTGGAACATTAGGATATTCAGCACCGGAGTATGTAATTCATGGCCAATTATCTGAGAAGGTTGATGTTTATAGTTACGGTGTTGCAATCTTGGAGATTATAAGTGGCCAAAAAAATAAGAAACTAGGAGTTGATGGTGATATTGAAGGCGAATTCCTCCTCCGAAAAGCTTGGAAGTTATATGAAGAAGGTACACATGCGGAGCTAGTGGACGATACCTTAGACCCTAATGATTATGATGTAGAAGAAGTGAAGAAAGTCATAGAGGTTGGTTTGCTTTGCATCCAAGCATCTGCTGAGATGAGACCAACAATGTCTGAGATTGTTGCTTTGCTCCAAACTAAGGACTTGTTAGAGAATATGAAACCCACTATGCCTATCTTGATTGAAACAAATTAG 2007 0.428 MKLSFLLLRRFQTPINTLISFALLTSFSSSSYSSFFFQNMFQPHVLPLIAFVFWSWRILDGVVSDPQINFLTRGCNPYNEYLVANVSLFEANINATLRDIREQISGQNKHFATAQQAASGGNTVSSLFQCRSYLSMPDCIACFDVAAPQILSCAAGEPGGRVVYDGCYLRYDISVAFFGATTQSINSASCGNQTITEEPAISFTSAVQQILMNLQTATPRITGFSVATKAQVPTNGPTIYAFAQCTETITQSECQNCLNVLYNNMQSCLPNSEGRAFADGCFLRYSTTSFFADNQTIDIAPSFKQGSSNNKGAIIGGVVGSVVVLALIFVALYVWVGRLKRPTRRVPGGDVIGATKLKGPAIYNYNDLKTATKNFSEENKLGQGGFGVVYKGTLKNGKEIAIKKLTFRHFTRMEEEFENEVKLISNVHHRNLVRLLGYCIYGKTRILVYEYMKNSSLDIFLFGKMQGSLNWKQRHDIILGTARGLAYLHEEFYVCIIHRDVKPNNILLDEDLQPKIADFGLARLLPEDKTHLSTNFAGTLGYSAPEYVIHGQLSEKVDVYSYGVAILEIISGQKNKKLGVDGDIEGEFLLRKAWKLYEEGTHAELVDDTLDPNDYDVEEVKKVIEVGLLCIQASAEMRPTMSEIVALLQTKDLLENMKPTMPILIETN 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3543g00003 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Pral3543g00003 668 Gene3D - 68 174 IPR038408 -
Pral3543g00003 668 Gene3D - 182 290 IPR038408 -
Pral3543g00003 668 Gene3D Phosphorylase Kinase; domain 1 352 451 - -
Pral3543g00003 668 Gene3D Transferase(Phosphotransferase) domain 1 452 660 - -
Pral3543g00003 668 Pfam Protein kinase domain 376 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00003 668 FunFam Cysteine-rich receptor-like protein kinase 2 341 451 - -
Pral3543g00003 668 ProSiteProfiles Protein kinase domain profile. 375 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00003 668 SMART serkin_6 375 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00003 668 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 128 666 - -
Pral3543g00003 668 ProSiteProfiles Gnk2-homologous domain profile. 68 176 IPR002902 -
Pral3543g00003 668 FunFam Cysteine-rich receptor-like protein kinase 2 185 290 - -
Pral3543g00003 668 ProSiteProfiles Gnk2-homologous domain profile. 183 290 IPR002902 -
Pral3543g00003 668 Pfam Salt stress response/antifungal 80 172 IPR002902 -
Pral3543g00003 668 Pfam Salt stress response/antifungal 190 287 IPR002902 -
Pral3543g00003 668 SUPERFAMILY Protein kinase-like (PK-like) 359 649 IPR011009 -
Pral3543g00003 668 CDD STKc_IRAK 381 649 - -
Pral3543g00003 668 FunFam Cysteine-rich receptor-like protein kinase 2 452 656 - -
Pral3543g00003 668 ProSitePatterns Protein kinases ATP-binding region signature. 381 404 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3543g00003 Pral-Chr3543 12969 16905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3543g00003 44 666 Receptor kinase-like Gene Family AT1G70520 37.931 2.14e-123 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3543g00003 Pkinase 6.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3543g00003 - - pcin:129300003 788.104