Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3543g00001 ATGAAACTCTCATTCCTCCTTCTTCGTCGTTTCCAAACACCAATCAATACCTTGATATCATTTGCTCTATTAACCTCTTTTTCCTCCTCCTCCTACTCCTCCTTCTTCTTCCAAAACATGTTTCAACCTCATGTCCTTCCTTTAATCGCCTTCGTCTTCTGGTCATGGCGGATTCTTGACGGCGTCGTTTCGGATCCCCAGATCAATTTTTTGACCAGAGGGTGCAACCCATACAACGAATACCTAGTGGCTAACGTCTCCCTCTTTGAAGCAAACATAAACGCAACACTGCGAGACATCAGAGAGCAGATCAGTGGCCAAAACAAGCACTTCGCCACCGCACAGCAAGCTGCCAGTGGTGGAAACACCGTCTCTAGTCTTTTTCAATGCAGAAGCTATCTCTCCATGCCCGACTGCATCGCCTGCTTCGACGTCGCCGCCCCTCAAATCCTCAGCTGTGCTGCCGGCGAACCGGGTGGCCGTGTTGTCTACGACGGGTGCTACCTCAGGTACGACATTAGTGTCGCTTTCTTTGGAGCTACAACACAGTCTATCAATAGTGCATCGTGTGGGAATCAGACTATAACAGAAGAACCTGCTATTTCATTTACCTCAGCTGTTCAACAAATTCTAATGAATCTCCAAACAGCAACTCCCAGAATCACTGGCTTCTCTGTAGCTACCAAGGCACAAGTTCCTACTAATGGTCCAACTATTTATGCATTTGCTCAGTGCACAGAAACTATCACTCAGAGTGAGTGCCAGAACTGCTTGAATGTTCTGTACAACAATATGCAGAGTTGTCTTCCCAATTCAGAAGGTTCAAGCAATAATAAGGGAGCCATTATAGGAGGTGTTGTTGGAAGCGTAGTAGTTCTTGCTTTGATCTTTGTTGCATTGTATGTCTGGGTGGGACGACTAAAAAGGCCAACTAGGAGGGTTCCTGGAGGAGACGTTATTGGAGCAACCAAGTTGAAAGGCCCGGCTATTTATAATTATAACGACCTGAAGACTGCAACCAAGAACTTCAGCGAAGAGAATAAGCTAGGACAAGGAGGATTTGGTGTTGTGTATAAGGGCACTTTGAAGAATGGAAAAGAAATTGCAATCAAGAAATTAACATTTCGCCATTTCACGAGGATGGAGGAGGAATTTGAAAATGAAGTGAAGCTCATAAGCAACGTTCATCATCGGAATCTTGTTCGACTCCTGGGATATTGTATTTATGGCAAAACTAGAATTCTTGTTTATGAATACATGAAAAATAGCAGTCTTGACATATTCTTATTCGGTAACCTTCTCTCAATTAACCGATCTTATGTACTGTTTTTCGTAAAATTAGTGGCATTATCAACGTATCATCATCTCCTCCAGCTAACGAACTTATTCACATGGCATAATTTTATTCGACTGAGTAAAATGCAAGGCTCACTCAATTGGAAGCAACGACATGATATAATTTTAGGCACTGCAAGGGGTCTCGCTTATTTGCATGAGGAATTCTATGTTTGTATCATACATAGAGATGTAAAGCCTAATAACATTCTCTTGGATGAGGATCTTCAACCTAAAATTGCTGATTTTGGGTTGGCAAGGCTTCTTCCTGAGGACAAAACTCATCTTAGCACCAACTTCGCTGGAACATTAGGATATTCAGCACCGGAGTATGTAATTCATGGCCAATTATCTGAGAAGGTTGATGTTTATAGTTACGGTGTTGCAATCTTGGAGATTATAAGTGGCCAAAAAAATAAGAAACTAGGAGTTGATGGTGATATTGAAGGCGAATTCCTCCTCCGAAAAGCTTGGAAGTTATATGAAGAAGGTACACATGCGGAGCTAGTGGACGATACCTTAGACCCTAATGATTATGATGTAGAAGAAGTGAAGAAAGTCATAGAGGTTGGTTTGCTTTGCATCCAAGCATCTGCTGAGATGAGACCAACAATGTCTGAGATTGTTGCTTTGCTCCAAACTAAGGACTTGTTAGAGAATATGAAACCCACTATGCCTATCTTGATTGAAACAAATTAG 2034 0.4223 MKLSFLLLRRFQTPINTLISFALLTSFSSSSYSSFFFQNMFQPHVLPLIAFVFWSWRILDGVVSDPQINFLTRGCNPYNEYLVANVSLFEANINATLRDIREQISGQNKHFATAQQAASGGNTVSSLFQCRSYLSMPDCIACFDVAAPQILSCAAGEPGGRVVYDGCYLRYDISVAFFGATTQSINSASCGNQTITEEPAISFTSAVQQILMNLQTATPRITGFSVATKAQVPTNGPTIYAFAQCTETITQSECQNCLNVLYNNMQSCLPNSEGSSNNKGAIIGGVVGSVVVLALIFVALYVWVGRLKRPTRRVPGGDVIGATKLKGPAIYNYNDLKTATKNFSEENKLGQGGFGVVYKGTLKNGKEIAIKKLTFRHFTRMEEEFENEVKLISNVHHRNLVRLLGYCIYGKTRILVYEYMKNSSLDIFLFGNLLSINRSYVLFFVKLVALSTYHHLLQLTNLFTWHNFIRLSKMQGSLNWKQRHDIILGTARGLAYLHEEFYVCIIHRDVKPNNILLDEDLQPKIADFGLARLLPEDKTHLSTNFAGTLGYSAPEYVIHGQLSEKVDVYSYGVAILEIISGQKNKKLGVDGDIEGEFLLRKAWKLYEEGTHAELVDDTLDPNDYDVEEVKKVIEVGLLCIQASAEMRPTMSEIVALLQTKDLLENMKPTMPILIETN 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3543g00001 677 SUPERFAMILY Protein kinase-like (PK-like) 328 662 IPR011009 -
Pral3543g00001 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Pral3543g00001 677 Gene3D - 68 174 IPR038408 -
Pral3543g00001 677 Gene3D - 182 284 IPR038408 -
Pral3543g00001 677 ProSiteProfiles Protein kinase domain profile. 343 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00001 677 Pfam Protein tyrosine and serine/threonine kinase 346 656 IPR001245 GO:0004672|GO:0006468
Pral3543g00001 677 Gene3D Transferase(Phosphotransferase) domain 1 463 669 - -
Pral3543g00001 677 Pfam Salt stress response/antifungal 190 273 IPR002902 -
Pral3543g00001 677 Pfam Salt stress response/antifungal 80 172 IPR002902 -
Pral3543g00001 677 ProSiteProfiles Gnk2-homologous domain profile. 68 176 IPR002902 -
Pral3543g00001 677 FunFam Cysteine-rich receptor-like protein kinase 2 462 665 - -
Pral3543g00001 677 Gene3D Phosphorylase Kinase; domain 1 320 419 - -
Pral3543g00001 677 ProSiteProfiles Gnk2-homologous domain profile. 183 293 IPR002902 -
Pral3543g00001 677 CDD STKc_IRAK 349 658 - -
Pral3543g00001 677 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Pral3543g00001 677 FunFam Cysteine-rich receptor-like protein kinase 2 308 419 - -
Pral3543g00001 677 SMART serkin_6 343 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3543g00001 677 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 128 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3543g00001 Pral-Chr3543 12969 16907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3543g00001 44 675 Receptor kinase-like Gene Family AT1G70520 34.627 4.48e-108 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3543g00001 PK_Tyr_Ser-Thr 8.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3543g00001 - - gmx:100813585 676.396