Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3541g00001 ATGTTGACCCCATGTTCTGGGGAGTGGGGACTGGTCAGGGAAGCAAACTCGAAAATGTGGAACTTCTGGACCAAGGGTTGCATTTATTTGGTGTGTATTTCTGCAATATCTCAGGCCTTATCTCAGGAACCCGAACTCGGATCTACCCGTGTTGTCTTTCAGACGAATTATGGCGATATAGAATTTGGTTTCTTTCCCACAGTTGCACCCAAAACCGTTGATCACATTTTTAAACTTGTGCGACTTGGATGCTATAATACAAATCATTTTTTCCGGGTAGATAAAGGCTTTGTGGCCCAAGTAGCGGATGTTAGGGGTGGAAGATCCGCTCCCATGAATGAAGAACAAAAAAGAGAAGCTGAAAAGACTGTTGTTGGTGAATTTAGCGAAGTCAAACATGTTAGAGGCATTCTTTCCATGGGAAGGTATAGTGATCCAGACAGTGGTGGATCCTCATTTTCAATGCTTCTAGGAGATGCTCCTCATCTTGACGGCCAGTATGCAATATTTGGAAGAGTCACTAAAGGTGATGATACATTGAGAAAGCTCGAGGAACTGCCTACTCGTAAAGAGGGGATATTTGTTATGCCAACAGAGCGCATTGCTATTCTGTCATCCTATTATTACGACACTGAGAGTGAAGATTGCGAACGAGACAGATCGATTTTGAAACGCAGGCTGGCTGCTTTAGCTGTCGAAATTGAGAGACAGAGGATGAAATGCTTCCCCTGA 732 0.4385 MLTPCSGEWGLVREANSKMWNFWTKGCIYLVCISAISQALSQEPELGSTRVVFQTNYGDIEFGFFPTVAPKTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVRGGRSAPMNEEQKREAEKTVVGEFSEVKHVRGILSMGRYSDPDSGGSSFSMLLGDAPHLDGQYAIFGRVTKGDDTLRKLEELPTRKEGIFVMPTERIAILSSYYYDTESEDCERDRSILKRRLAALAVEIERQRMKCFP 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3541g00001 243 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 52 208 IPR002130 GO:0000413|GO:0003755
Pral3541g00001 243 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 24 243 IPR044233 -
Pral3541g00001 243 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 51 204 IPR002130 GO:0000413|GO:0003755
Pral3541g00001 243 Gene3D - 37 217 IPR029000 -
Pral3541g00001 243 SUPERFAMILY Cyclophilin-like 50 211 IPR029000 -
Pral3541g00001 243 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 165 180 IPR002130 GO:0000413|GO:0003755
Pral3541g00001 243 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 IPR002130 GO:0000413|GO:0003755
Pral3541g00001 243 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 79 IPR002130 GO:0000413|GO:0003755
Pral3541g00001 243 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 90 102 IPR002130 GO:0000413|GO:0003755
Pral3541g00001 243 CDD cyclophilin 52 205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3541g00001 51 209 U-box Gene Family AT5G67530 29.341 1.32e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3541g00001 - - pcin:129321584 409.453