Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3533g00068 ATGAAATTGGTGGGGATGGATCCAGGAGCTATGATGAACGAAGGTTCATTTGTGAACGGGGCGCCTAATACGACGCCGTATAATCTGGCGGATATCTGGCAATCACCGATGAACATTGGTGCGGGTCTCGGAGATTCCGGGGTCGGGTTGGGGTTGAGGAGGCCACAGTTTGGGCACAATTTGGGGCTGCCACCGTTTAGTGATTTTTCGGGTCATACGAATCGAGATGTGCCCCGTAATGATCAAACCAGCTCGGAGCAGAGAGGTAATAATAATGATGATCATGGAGTCAATAACAATAAGAAGCGTCGTGATTTCGAGGATGAGTCCACCAAGGCCGTCTCCACCAGTACTGACAGTGATGGCATGGATGATGGTGGTGAAGGAAAACGGCTTAAAGCTTCAGGGAATAAGAATGAGAGTCGAGACACCAAAGCTGAAGCACAACCCAGTTCAGGAAAGCCTGCGGAGCAAAATAATCAGCCACCTCCTTTTGAGCCTCCTAAGCAAGATTACATTCATGTTCGAGCAAGAAGAGGCCAAGCTACTGATAGCCACAGTCTAGCAGAAAGAGCTAGAAGGGAGAAGATAAGCGAGCGGATGAAAATTCTTCAGGATTTGGTCCCTGGCTGTAATAAGGTTATTGGGAAAGCACTGGTCCTTGATGAGATTATAAATTATATCCAATCATTACAACGCCAAGTTGAGTTCCTATCTATGAAACTTGAAGCTGTAAATTCAAGACTGAACTCTGGCATCGATGTCTTTCCTCCTAAAGATTTTGGTCAACAATCATTTGAAGCGGCTGGCATGGCATTTGGCTCACAAGCTACAAGAGAGTATAGCCGGGGCTTATCACCGGAGTGGTTACATATGCAGGTAGGTGGTGGTTTTGAAAGAACGTCTTAG 909 0.4664 MKLVGMDPGAMMNEGSFVNGAPNTTPYNLADIWQSPMNIGAGLGDSGVGLGLRRPQFGHNLGLPPFSDFSGHTNRDVPRNDQTSSEQRGNNNDDHGVNNNKKRRDFEDESTKAVSTSTDSDGMDDGGEGKRLKASGNKNESRDTKAEAQPSSGKPAEQNNQPPPFEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNSGIDVFPPKDFGQQSFEAAGMAFGSQATREYSRGLSPEWLHMQVGGGFERTS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3533g00068 302 MobiDBLite consensus disorder prediction 76 94 - -
Pral3533g00068 302 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 181 231 IPR011598 GO:0046983
Pral3533g00068 302 MobiDBLite consensus disorder prediction 62 170 - -
Pral3533g00068 302 MobiDBLite consensus disorder prediction 123 147 - -
Pral3533g00068 302 Gene3D - 178 254 IPR036638 GO:0046983
Pral3533g00068 302 FunFam Basic helix-loop-helix transcription factor 178 250 - -
Pral3533g00068 302 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 179 248 IPR036638 GO:0046983
Pral3533g00068 302 Pfam Helix-loop-helix DNA-binding domain 185 232 IPR011598 GO:0046983
Pral3533g00068 302 SMART finulus 187 237 IPR011598 GO:0046983
Pral3533g00068 302 Coils Coil 228 248 - -
Pral3533g00068 302 MobiDBLite consensus disorder prediction 95 114 - -
Pral3533g00068 302 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 81 270 IPR024097 GO:0006355
Pral3533g00068 302 CDD bHLH_AtBPE_like 171 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3533g00068 Pral-Chr3533 1074228 1078120 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3533g00068 6 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 56.471 2.73e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral3533g00068 HLH 2.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3533g00068 - - qsa:O6P43_033086 388.267