Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3533g00066 ATGAGTGGATGGGACAGGATTCGAACATCATCGTCTTCTCCAAGATCGTCTCTTGGAATGGGTTCCAATCCGACTCGTAACCTTCCCAACCGCATACCTTCCAGTCGAACTGTTCAACTCGGCCGAGTCCAGCCCCAAGCCCCTGGTCATCGTACCGTTTTCTGCAACGATCGCGACGCCAATCGTCCCGTCCGATTCAAGGGGAATTCGATATCAACCACAAAATTCAATCTTTTCACTTTCTTGCCAAAAGCTCTGTTTGAACAGTTCAGGCGGGTGGCTAATCTATACTTTCTTACAATCTCAATTTTGTCAACCACACCTATCAGTCCTGTGTCTCCAATAACTAATGTGGCTCCTCTATCACTGGTGCTTCTTATCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGCTTTCAGAATGACTTGGCCGTAAACAACAATTTGATTGATGTTTTGCAAGACCAAAAGTGGGTTTCCATACCCTGGAAAAGGTTGCAGGTTGGAGATGTCATCAGGGTTAAGCAGGATGGGTTCTTTCCCGCAGATCTGCTTTTCCTGGCCAGTACCAATGCTGATGGTGTCTGCTACATTGAGACTTCCAATTTGGATGGGGAAACTAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCAGAGAAGGCATCTGAGTTTAAAGGTGAAGTGCAGTGTGAACAACCAAACAATTCATTGTATACCTTCACTGGGAATCTTATAATTCAAAAGCAAACACTGCCTCTCAGTCCTAACCAACTTTTGTTGCGAGGATGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTTATTTTTACCGGACATGAAACAAAGGTAATGATGAATACAATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAGGCTCATACTTGCTCTATTTGCGACTCTCTTTGTAATGTGTTTACTTGGAGCCATTGGCAGTGGCATCTTCGTAAACAACAAGTATTTCTACTTACGTCTTAATGCAGGTGATGAGGGTTCTGGGCAGTTCAACCCTGGGAATAGAATTTTGGTTATTACTTTGACGATGTTTACCCTCATCACTCTATACTCGACAATCATCCCCATTTCACTTTACGTGTCAATAGAGATGATCAAATTTATTCAGTGCACTCAGTTTATCAACAAAGATTTGCGCATGTACCACAGTGAGACCAACACCCCTGCGTTGGCTAGAACTTCCAATCTAAATGAAGAACTTGGGCAGGTGGAATACATCTTCTCTGACAAAACTGGGACCCTGACAAGGAACTTGATGGAATTCTTCAAGTGTTCAATTGGAGGGGAGATCTATGGAAATGGCATCACTGAAATTGAGAGAGGAATGGCTGAACGCAATGGCATTAGAATGCAGGAAAATAGGTCAACCAATGCTGTGCAAGAAAAGGGTTTTAATTTTGATGATACAAGGCTTATGCGTGGAGCCTGGAGGAATGAGCCTAATCCTGATAGTTGCAAGGAATTTTTCAGATGTCTTGCTATATGTCATACTGTACTTCCTGAGGGTGATGAGTCCCCTGAAAAGATCAGATATCAGGCTGCATCACCTGATGAGGCTGCTTTGGTTATTGCTGCAAAGAACTTCGGTTTCTTCTTTTACAGGCGCACACCTACCTCAATATATGTTCGTGAATCTCATGTTGAAAAGATGGGTAAAATTCAGGATGTGTCTTATGAGATTTTGAATGTGCTTGAGTTTAACAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTATCCAGATGGGAGACTTGTGCTATACTGTAAGGGTGCTGACAGTGTAATCTATGAGAGATTGGCTGATGGTTATAATGACATAAAGAAAGTGACTAGGGATCATTTGGAACAATTTGGGTCTGCTGGACTGCGTACTTTATGCTTAGCCTACAAAGAGTTGCCCCCTGATGTGTATGAAAGCTGGAATGAGAAGTTCATCCAAGCCAAGTCATCTCTTCGTGATCGTGAAAAGAAGTTAGATGAGGTGGCAGAACTTATAGAACATGGTCTCGTTTTGATTGGTTGCACTGCCATAGAAGACAAGCTTCAAGAAGGAGTACCAAATACTATAGAGACTCTTCAAAGGGCCGGCATTAAAATTTGGGTTCTCACAGGAGATAAGATTGAAACAGCCATAAATATTGCCTATGCATGCAATCTAATAAACAATGAGATGAAGCAATTTGTCATAAGTTCTGAAACAGATGTGATTAGAGAAGCGGAGGAAAGGGGTGACCAAGTGGAAATTGCACGTGTCACTAAGGAAGAAGTGAAAAAAGAGCTGAAGAAGTGCCTTGAGGAAGCACAGAGCTACCTTTCATCTCTATCTGGACCTAAATTAGCTCTTGTAATTGATGGGAAATGTCTAATGTATGCATTAGATCCTAGTTTAAGAGTGATGCTGCTGAATTTGAGTTTAAATTGTCATGCAGTTGTTTGCTGCCGAGTTTCTCCTTTACAGAAAGCACAGGTCACAAGTTTGGTCAAAAAGGGTGCCCGGAAAATAACACTTAGTATTGGTGATGGAGCCAATGATGTCAGCATGATTCAGGCTGCTCATGTTGGTGTTGGCATAAGTGGGCTAGAGGGGATGCAAGCAGTAATGGCTAGTGATTTTGCCATTGCACAGTTTCGTTACCTTGCAGATTTATTACTTGTTCATGGCCGGTGGTCATATCTTCGAATATGCAAGGTGGTGACGTACTTCTTTTACAAGAATCTCACATTCACTCTCACTCAGTTCTGGTTTACTTTTCAAACTGGGTTTTCTGGTCAGAGGTTCTATGATGATTGGTTTCAGTCATTGTATAATGTGATCTTCACAGCACTACCAGTGATCATTGTTGGACTGTTTGACAAGGATGTCAGTGCATCTCTTTCCGTGAAGTACCCTGAGTTGTACATGGAGGGGATAAGAAATGTCTTCTTCAAATGGAGGGTTGTGGCAATATGGGCCTTTTTTTCGGTTTACCAGTCTCTAATATTGTACTATTTTGTTAGTGCAGCAAGTTTAAGTGCTAAAAATTCAGCTGGCCTAACATTTGGAGTTTGGGATGTCAGTACAATGGCGTTCACATGTGTTGTAATAACTGTGAACTTGCGGCTTCTTATGATTTGTAATTCAATTACAAAGTGGCACACTATCAGCGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGCTTTCATATATTGCGCCATCATTGGACAGGGGAATACTTATTTTGTCATATATGTCTTGATGAGTACGATCTATTTCTACCTCTCAATTATTTTAGTACCCGTTGTCGCACTTTTTGGTGACTTTGTTTATCAAGGGGTTCAAAGGTGGTTCTTCCCCTATGACTATCAGATTGTTCAGGAAATGCATCGGCACGAAGGGGAGGGTACTGGCAGGGCACGGCTGCTGGAGATAGAGGACCAGCTTACACCAGCAGAGGCAAGAAGCTATGCCATATCTCAACTCCCTCGCGAGATCTCGAAGCACACAGGGTTTGCTTTTGATTCGCCTGGGTACGAGTCCTTTTTCGCTGCACAGTTAGGTGTCTATGCCCCACAAAAGGCATGGGATGTTGCCAGACGAGCTAGTGCCAGGTCAAAGCCCAAAGTCCAGAAAAAATGA 3690 0.4247 MSGWDRIRTSSSSPRSSLGMGSNPTRNLPNRIPSSRTVQLGRVQPQAPGHRTVFCNDRDANRPVRFKGNSISTTKFNLFTFLPKALFEQFRRVANLYFLTISILSTTPISPVSPITNVAPLSLVLLISLIKEAFEDWKRFQNDLAVNNNLIDVLQDQKWVSIPWKRLQVGDVIRVKQDGFFPADLLFLASTNADGVCYIETSNLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIIQKQTLPLSPNQLLLRGCSLRNTEYIVGVVIFTGHETKVMMNTMNVPSKRSTLERKLDRLILALFATLFVMCLLGAIGSGIFVNNKYFYLRLNAGDEGSGQFNPGNRILVITLTMFTLITLYSTIIPISLYVSIEMIKFIQCTQFINKDLRMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGNGITEIERGMAERNGIRMQENRSTNAVQEKGFNFDDTRLMRGAWRNEPNPDSCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKNFGFFFYRRTPTSIYVRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADSVIYERLADGYNDIKKVTRDHLEQFGSAGLRTLCLAYKELPPDVYESWNEKFIQAKSSLRDREKKLDEVAELIEHGLVLIGCTAIEDKLQEGVPNTIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDVIREAEERGDQVEIARVTKEEVKKELKKCLEEAQSYLSSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSVKYPELYMEGIRNVFFKWRVVAIWAFFSVYQSLILYYFVSAASLSAKNSAGLTFGVWDVSTMAFTCVVITVNLRLLMICNSITKWHTISVGGSILAWFIFAFIYCAIIGQGNTYFVIYVLMSTIYFYLSIILVPVVALFGDFVYQGVQRWFFPYDYQIVQEMHRHEGEGTGRARLLEIEDQLTPAEARSYAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPQKAWDVARRASARSKPKVQKK 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3533g00066 1229 SFLD p-type atpase 413 913 IPR044492 -
Pral3533g00066 1229 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 46 1185 - -
Pral3533g00066 1229 SUPERFAMILY Calcium ATPase, transmembrane domain M 61 1136 IPR023298 -
Pral3533g00066 1229 SUPERFAMILY HAD-like 419 904 IPR036412 -
Pral3533g00066 1229 ProSitePatterns E1-E2 ATPases phosphorylation site. 433 439 IPR018303 -
Pral3533g00066 1229 FunFam Phospholipid-transporting ATPase 695 902 - -
Pral3533g00066 1229 SFLD Haloacid Dehalogenase 413 913 - -
Pral3533g00066 1229 Gene3D - 131 296 - -
Pral3533g00066 1229 Coils Coil 770 797 - -
Pral3533g00066 1229 NCBIfam HAD-IC family P-type ATPase 835 941 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral3533g00066 1229 SUPERFAMILY Calcium ATPase, transduction domain A 149 292 IPR008250 -
Pral3533g00066 1229 CDD P-type_ATPase_APLT_Dnf-like 68 1022 - -
Pral3533g00066 1229 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 438 701 IPR023299 GO:0000166
Pral3533g00066 1229 Pfam Phospholipid-translocating ATPase N-terminal 53 117 IPR032631 -
Pral3533g00066 1229 FunFam Phospholipid-transporting ATPase 127 296 - -
Pral3533g00066 1229 MobiDBLite consensus disorder prediction 1 42 - -
Pral3533g00066 1229 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Pral3533g00066 1229 PRINTS P-type cation-transporting ATPase superfamily signature 431 445 - -
Pral3533g00066 1229 FunFam Phospholipid-transporting ATPase IC 428 440 - -
Pral3533g00066 1229 Pfam E1-E2 ATPase 151 387 - -
Pral3533g00066 1229 MobiDBLite consensus disorder prediction 1 51 - -
Pral3533g00066 1229 Gene3D - 693 902 IPR023214 -
Pral3533g00066 1229 NCBIfam phospholipid-translocating P-type ATPase 66 1144 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pral3533g00066 1229 Gene3D - 557 692 IPR023299 GO:0000166
Pral3533g00066 1229 FunFam Phospholipid-transporting ATPase 539 694 - -
Pral3533g00066 1229 Pfam Cation transport ATPase (P-type) 528 622 - -
Pral3533g00066 1229 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1136 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3533g00066 Pral-Chr3533 940505 962551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3533g00066 30 1229 Primary Pumps ATPases AT1G59820 78.838 0.0 2036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3533g00066 K14802 - gmx:100815547 2133.61