Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3533g00056 ATGTCACCGGACGGCCATCTCATTTCGTCGACCCCAGGAGCCTTCAGGCTCCGCTGGGACGTCTTCCTGAGCTTCAGAGGTGCCGATACTCGTCGTTGCTTCACTACTCACCTTTACAACGCCCTCGAATCTCGCGGCGTTCGGGTTTTCCTTGACGACGATGGACTCGATCGCGGTGACAAGATAGCCCCGAGTCTGCTTGATGCCATAGATGACTCGGCCGCTTCGATTATCATCTTCTCCCCGAGATATGCTTCTTCTCATTGGTGTCTGGAGGAGCTCGCAAAGATTTGGAACTGCGGGAGACTGATTCTGCCGGTGTTTTTCAACGTCGACCCGAGTCATGTTCGGAAACAAGAGGGTCCATTCAGAAAATACTTCAAGAAACACGAAGCCAAGAGGAGCAAAGAAGAGGTAATCGGATGGAGGGAAGCTTTGAAGAAAGTAGGTGGAATTGCTGGTTTCCCTTTCTGGCATCCCAGTGAAAGAGAAAAGAGAGATGACCTGATTGGACTTTTAGTGACAAGGATTCTGAGGGAACTGAGTAATGCTCCAGTTGGTGTGGCTGAGTTTACCGTTGGACTCGATGCTCGCATTGAACAATTGTTGGAATTGTTAGACATGAGATCCAACGGCATGAGGGTATTGGGGTTGTATGGGATGGGTGGGATTGGTAAGACTACCCTAGCGAAGGCGTTTTTTAACAGAATCGTTGTGGATTTTGAGCATCGCAGCTTCATTTCAAGTGTCAGAGAAGTTTCATCCAAAGATGAGGGTTTAATTTCTCTAAGAAACAGAATTATAAGTGACATTTCCTCTCAAGCAGTGGTTGGTAACGATATTTCTGCTTTCAGAAGAGCAGTTAGTGAAAACCGTGCTCTGATAATCCTGGATGATGTGGATGATGTGAAGCAGCTCGATACTCTAATTGGCAAAAGAGAATGGTTCCATGAGGGAAGCCGTATATTAGTCACATCAAGGGATACGCGAGCTTTGCCTGAGACTCATGTTAATGTCTTGTACGAAGTTCAGATATTGGATGACTCTGAGTCGCTAGAACTATTCTGTTACCATGCAATGCGAAGAAAGAAACCTGCAGGCGAAACTTTCTTGAAATTTTCGAAGGACATAGTGTCTCTAACAGCAAGATTGCCTTTAGCTCTGGAAGTGTTTGGTTCAATGTTGTTTGGTAAGAAAAGGGAAAAGGAATGGGATGATGCTGTGGAGAAGCTGAAGCTGATTCGACCTGGGAATCTCCAAGAAGTGTTGATGATTAGTTATGAGGGGTTAGATAAACAAGAGAAATGCATCTTCCTTGATATTGCTTGCTTGTTTGTCCAAATGAGCATGAAGCGAGAAGATGTGATCGACGTATTGAGAGGCTGTGGATTTAAGGGAGAGATAGCAATCGCAGTTCTCACAGAGAAATGTCTGATCAAAATCAGGGACGAAACCATTTGGATGCATGATGAAATTAGAGACATGGGGAGGCAAATTGTTGTGGATGAAAACCTTGATGATCCTGGTATGCGTAGTAGATTGTGGGATCGATCTGAAATTCTAAATGTCTTGAGGAATTTGAAGGGAACTCGTAGTACTCGAGGGATGGTCCTAGACTTCGAGAAAAGATCTGCTAAAGATCATAAAGGTGATGAACTAATTTCTGGGAACACAAATGCCCTGGCATTCTTTAAACAGATGCACAAGAAATATTTTCAACGAGTTGAGAAAGACAAAGAGGCTCTAGTGATTCACACTAAGTCCTTTGAACCCATGGTGAACTTGGCGCTGCTTCAGATCAATAATTTGCGATTGGAAGGGAAATTCAAATCTTTCCCTGCAGAACTGAAGTGGCTACAATGGCAAGGATGCCCTTTAAGATTCATGCCTTCTGATTTTTGGCCCAGGGAACTGGCTGTCCTTGACCTTACTCACAGCAATGTTCAGAACTTGTGGGATCGGAAAGGCTCCAAGGTGCCAGAGAGCATAATGGTCATGAACATGTCCCGCTGCTACCAACTAGAAACTCTTCCTGATCTCTCTGGGTGTCAACGTTTAGAGAAGATTGTTCTTGAGAACTGCTTCAACCTGAGTAGGATTCACAAATCAGTTGGCAGTTTGACTACACTTCGTCATTTGAATCTGACTCATTGTAGAGAACTTATTGAGTTACCCAATGATATATCTGGGCTGAAAAATCTGGAGAGCCTCTGTCTCTCTGACTGCTGGAAGTTGAAATCGTTACCAGAAGAAAATATGGCCAACTTGAAATCACTGAGAAAACTTCTTGCTGATCGCACGGCCTTAGTGAAGCTGCCTGAGACTATTTTTCACCTTGAGAAGCTTGAAACTCTTATTTTAACTGGTTGCCATCACTTAAAAAGGCTACCCGACAACATAGGACTCCTGGGTTCTCTGCAAGAGCTGTCTCTCGACCAATCTGGATTAGAAGAACTACCCAACTCTATCGGGCGTTTGAAAAACCTTGAAAGGCTTGGTTTGATGCATTGCAAATCTCTCACTGGGATTCCTGATTCTATTGGAAATCTCATATCACTTTCAGAGCTTCGGCTTTCTGGTAGTGCTATCGGAGAGATTCCTTCTTCAATTGGATCGTTGTCTTATCTAAAAGAACTCTCAGTAGGAAATTGTGAGTTTCTGAATAAATTGCCCGAGTCAGTTAAGTCTTTGGTTTCAATTGTTGAGCTTCAGCTAGACGGGGCAGCAATCACAGATTTACCAGATGAGATTGGAAATATGACATTACTTAAAAAGCTTGAAATGAGGAATTGTCAGATGAAATATCTACCTAAATCGATTGGCAACCTCACAGCTCTCACAACCTGGAACATTTTCAAAGGTAACATTGTAGAACTGCCTGACTCCATCGGAAGGCTCGAGAATCTAGTCCATTTAAGGTTGGACCAATGTACAATGCTCAGAAGGCTTCCACATTCTATAGGACATTTGAAGTCCTTGTATCATCTTCGGATGGAGGAAACGGGTCTGACAGAATTACCTCAAAGCTTTGGCATGCTTACCAGTTTAAGGACGTTGAAAATGGCCAAGAAGTCCGAAAATAACATGCTTGAAGATTCTTTTGTAATCTCATCTTTTTTGTGCAATATGATATTTCTGTGTGATCTGGATGCCCGTGGTTGGAGAATATCTGGGAAAATTCCTGATAATTTTGAGAACTTGTCCTCTTTAGAGACTTTGAATCTGAGCCAAAACAAATTCTACAGCCTTCCTTCCAGTATGGCGGGCCTTTCCTTTCTCAAGGAACTTCGTATTCAAAACTGCATTGAACTGGTGTCTCTCCCTGCTCTTCCCTCAAGCTTGACGAAGCTGAATGCTGCAAACTGTTGTGCCTTACAAAGCATTCATGATCTCTCAAATTTAAAAAGTCTGAAGGATCTGAACCTCACAAATTGTGTACAGTTAGTGGATATTCCTGGCCTTGAACGCTTAGAGTCTCTGAGGTGGTTGTACTTGGGTGGATGCCTTAAGTGCTCCTCCGCAGTCCGCAGAAGGCTTTCTAAGGTTACACTGAGGAATTTATTGAACTTGAGCTTGCCAGGAACAAGATTACCCAAGTGGTTTTCAGGACAAACTGTAAGCTTGTCAAAGCCCAAGTACCGTAAATTAACAGGTGTAATCATAGGTATCATTCTTTCAATCAACCATGATGTTCCTAGTGAACGGCGAAATGTTCTTCCTGGAGTGGTTGATATCAAGGTAGATGTCTTCAAACTCGGCAAAAATACATGTACTTCAGGTTTGGACTTGCGTGGGTTGCCAAAATCCAATGAGGAACACATATACCTTTGCCGGTACCCGGATTACCATCATCTCTTCTCTTTCATGCGAGATGGTGACACATTATGTGTGACTCGATTAAACCCACCTGTGGATAAGGGGTTAGAGTTGAAAAAATGTGGGTTTCATTTGATCTTTGAAGGGGATGACGATTACGGCGGAGCTGAAGAATCTGTGGACGGAAACTTACAATCCGTGTCAGAAAGATTGGCCAAGTTTTTCGACAGTTACGAAGAAGGAGGTAGCTCCGAAAATGGAATTGAGAGTGAAGATAATGATGATGAGCGCCAAACGCAATTGGAGACTCAAGAAAGGGAAGAAACAATCTCGTCATCGTCTATCCTTGGCATCTCTAATATCTTCTATTTTATTAGTGCGTTCGTTCTCTTCTTGAGCTGGCTGCTAATAGAATTTTTCTTCAGCTATGATATATAG 4254 0.4316 MSPDGHLISSTPGAFRLRWDVFLSFRGADTRRCFTTHLYNALESRGVRVFLDDDGLDRGDKIAPSLLDAIDDSAASIIIFSPRYASSHWCLEELAKIWNCGRLILPVFFNVDPSHVRKQEGPFRKYFKKHEAKRSKEEVIGWREALKKVGGIAGFPFWHPSEREKRDDLIGLLVTRILRELSNAPVGVAEFTVGLDARIEQLLELLDMRSNGMRVLGLYGMGGIGKTTLAKAFFNRIVVDFEHRSFISSVREVSSKDEGLISLRNRIISDISSQAVVGNDISAFRRAVSENRALIILDDVDDVKQLDTLIGKREWFHEGSRILVTSRDTRALPETHVNVLYEVQILDDSESLELFCYHAMRRKKPAGETFLKFSKDIVSLTARLPLALEVFGSMLFGKKREKEWDDAVEKLKLIRPGNLQEVLMISYEGLDKQEKCIFLDIACLFVQMSMKREDVIDVLRGCGFKGEIAIAVLTEKCLIKIRXDETIWMHDEIRDMGRQIVVDENLDDPGMRSRLWDRSEILNVLRNLKGTRSTRGMVLDFEKRSAKDHKGDELISGNTNALAFFKQMHKKYFQRVEKDKEALVIHTKSFEPMVNLALLQINNLRLEGKFKSFPAELKWLQWQGCPLRFMPSDFWPRELAVLDLTHSNVQNLWDRKGSKVPESIMVMNMSRCYQLETLPDLSGCQRLEKIVLENCFNLSRIHKSVGSLTTLRHLNLTHCRELIELPNDISGLKNLESLCLSDCWKLKSLPEENMANLKSLRKLLADRTALVKLPETIFHLEKLETLILTGCHHLKRLPDNIGLLGSLQELSLDQSGLEELPNSIGRLKNLERLGLMHCKSLTGIPDSIGNLISLSELRLSGSAIGEIPSSIGSLSYLKELSVGNCEFLNKLPESVKSLVSIVELQLDGAAITDLPDEIGNMTLLKKLEMRNCQMKYLPKSIGNLTALTTWNIFKGNIVELPDSIGRLENLVHLRLDQCTMLRRLPHSIGHLKSLYHLRMEETGLTELPQSFGMLTSLRTLKMAKKSENNMLEDSFVISSFLCNMIFLCDLDARGWRISGKIPDNFENLSSLETLNLSQNKFYSLPSSMAGLSFLKELRIQNCIELVSLPALPSSLTKLNAANCCALQSIHDLSNLKSLKDLNLTNCVQLVDIPGLERLESLRWLYLGGCLKCSSAVRRRLSKVTLRNLLNLSLPGTRLPKWFSGQTVSLSKPKYRKLTGVIIGIILSINHDVPSERRNVLPGVVDIKVDVFKLGKNTCTSGLDLRGLPKSNEEHIYLCRYPDYHHLFSFMRDGDTLCVTRLNPPVDKGLELKKCGFHLIFEGDDDYGGAEESVDGNLQSVSERLAKFFDSYEEGGSSENGIESEDNDDERQTQLETQEREETISSSSILGISNIFYFISAFVLFLSWLLIEFFFSYDI 1418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3533g00056 1418 ProSiteProfiles Leucine-rich repeat profile. 1070 1091 IPR001611 GO:0005515
Pral3533g00056 1418 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 183 - -
Pral3533g00056 1418 Gene3D - 17 182 IPR035897 -
Pral3533g00056 1418 Pfam TIR domain 19 165 IPR000157 GO:0007165
Pral3533g00056 1418 SUPERFAMILY L domain-like 889 1199 - -
Pral3533g00056 1418 SMART LRR_typ_2 851 874 IPR003591 -
Pral3533g00056 1418 SMART LRR_typ_2 1068 1091 IPR003591 -
Pral3533g00056 1418 SMART LRR_typ_2 898 921 IPR003591 -
Pral3533g00056 1418 SMART LRR_typ_2 804 827 IPR003591 -
Pral3533g00056 1418 SMART LRR_typ_2 991 1013 IPR003591 -
Pral3533g00056 1418 SMART LRR_typ_2 757 780 IPR003591 -
Pral3533g00056 1418 Gene3D Ribonuclease Inhibitor 578 776 IPR032675 -
Pral3533g00056 1418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 441 IPR027417 -
Pral3533g00056 1418 Gene3D - 345 431 IPR042197 -
Pral3533g00056 1418 Pfam NB-ARC domain 197 413 IPR002182 GO:0043531
Pral3533g00056 1418 ProSiteProfiles TIR domain profile. 17 185 IPR000157 GO:0007165
Pral3533g00056 1418 SUPERFAMILY L domain-like 489 915 - -
Pral3533g00056 1418 Gene3D Ribonuclease Inhibitor 777 1107 IPR032675 -
Pral3533g00056 1418 SMART till_3 18 152 IPR000157 GO:0007165
Pral3533g00056 1418 PRINTS Disease resistance protein signature 706 722 - -
Pral3533g00056 1418 PRINTS Disease resistance protein signature 287 301 - -
Pral3533g00056 1418 PRINTS Disease resistance protein signature 215 230 - -
Pral3533g00056 1418 PRINTS Disease resistance protein signature 381 395 - -
Pral3533g00056 1418 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 155 IPR035897 -
Pral3533g00056 1418 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 800 IPR044974 GO:0006952
Pral3533g00056 1418 Gene3D - 183 339 IPR027417 -
Pral3533g00056 1418 Gene3D Ribonuclease Inhibitor 1108 1230 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3533g00056 Pral-Chr3533 783359 789582 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3533g00056 19 833 WRKY Transcription Factor Family AT4G12020 29.186 3.87e-78 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3533g00056 - - lang:109340539 1650.18