Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3533g00054 ATGAGATCCAACGGCATGAGGGTATTGGGATTGTATGGGATGGGTGGGATTGGTAAGACTACCCTAGCGAAGGCTTTTTTTAACAGAATCATTGTGGATTTTGAGCATCGCAGCTTCATTTCAAGTGTTAGAGAAGTTTCATCCAAAGATGAGGGCCTAATTTCTCTAAGAAACAGAATTATAAGTGACATTTCCTCTCAAGCAGTGGTTGGTAACGATATTTCTGCTTTCAGAAGAGCAGTTAGTGAAAACCGTGCTCTGATAATCCTGGATGATGTGGATGATGTGAAGCAGCTCGATACTCTAATTGGCAAAAGAGAATGGTTCCATGAGGGAAGCCGTATATTAGTCACATCAAGGGATACGCGAGCTCTGCCTGAGACTCATGTTAATGTCTTGTACGAAGTTCAGATATTGGATGACTCTGAGTCGCTAGAACTATTCTGTTACCATGCAATGCGAAGAAAGAAACCTGCAGGCGAAACTTTCTTGAAATTGTCGAAGGAAATAGTGTCTCTAACAGCAAGATTGCCTTTAGCTCTGGAAGTGTTTGGCTCAATGTTGTTTGGTAAGAGAAGGGAAAAGGAATGGGTTGATGCTGTGGATAAGCTGAAGCTGATTCGACCTGGGAATCTCCAAGAAGTGTTGCAGATTAGTTATGAGGCGTTAGATAAACAAGAGAAATGCGTCTTCCTTGATATTGCTTGCTTGTTTGTCCAAATGAGCATGAAGCGAGAAGATGTGATCGACGTATTGAGAGGCTGTGGATTTAAGGGAGAGATAGCAATCGCAGTTCTCAGAGAGAAATGTTTGATCAAAATCAGAGAGGACGAAACCATTTGGATGCATGATCAAATTAGAGACACGGGGAGGCAAATTGTTGTGTATGAAGACCTTGATGATCCTGGTATGCGTAGTAGATTGTGGGATCGATCTGAAATTCTAAATGTCTTGAGGAATTTGAAGGTAAGGATCCTGATAAAGGCTTTTCAGTTTGAATATAAATTCTTTTTGTGTGTCTGTGTCATCTGA 1032 0.4128 MRSNGMRVLGLYGMGGIGKTTLAKAFFNRIIVDFEHRSFISSVREVSSKDEGLISLRNRIISDISSQAVVGNDISAFRRAVSENRALIILDDVDDVKQLDTLIGKREWFHEGSRILVTSRDTRALPETHVNVLYEVQILDDSESLELFCYHAMRRKKPAGETFLKLSKEIVSLTARLPLALEVFGSMLFGKRREKEWVDAVDKLKLIRPGNLQEVLQISYEALDKQEKCVFLDIACLFVQMSMKREDVIDVLRGCGFKGEIAIAVLREKCLIKIREDETIWMHDQIRDTGRQIVVYEDLDDPGMRSRLWDRSEILNVLRNLKVRILIKAFQFEYKFFLCVCVI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3533g00054 343 Gene3D - 1 132 IPR027417 -
Pral3533g00054 343 PRINTS Disease resistance protein signature 174 188 - -
Pral3533g00054 343 PRINTS Disease resistance protein signature 80 94 - -
Pral3533g00054 343 PRINTS Disease resistance protein signature 8 23 - -
Pral3533g00054 343 Gene3D - 138 224 IPR042197 -
Pral3533g00054 343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 234 IPR027417 -
Pral3533g00054 343 SUPERFAMILY "Winged helix" DNA-binding domain 212 318 IPR036390 -
Pral3533g00054 343 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 321 IPR044974 GO:0006952
Pral3533g00054 343 Pfam NB-ARC domain 4 213 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3533g00054 Pral-Chr3533 748011 749285 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3533g00054 6 314 WRKY Transcription Factor Family AT5G45050 33.981 5.28e-46 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3533g00054 - - mtr:11408681 433.335