Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3533g00052 ATGTCACCGGGCGGCGATGTTAGTTCGTCAACTCCGGCATCGTTCAGGCGCCGCTGGGACGTGATCCTGAGCTTCAGAAGTTCGGATAATTGTGGTTGCTTCACCGAACCCCTGTACAACGCTCTCCAATCTAGCCGCGTTCGGGTTTTTCTCGACGACGTTGGATTGGATCGCGGTGACCAGATGGCCCCGAGTCCGCAAGGAGCTATCGATGACTCGGCCGCTTCGATCATCATCGTCTCTCCTAACTACGCTTCTTCTCATTGGAGTCTGGAGAAGCTCGCTAAGATTTGCGACTGTGGGAGACTGATTTTGCCGGTGTTCTTCAACGTCGATCCGCGTGATGTCCGAAAACAAGGGGGTCCATTCAAAGATTCTTTTGATGATCACAAAGCCAAGAGGGCCGAAGAAGAGGTACTAAGGTGGAGGGAAGCTATGAAGAAAGTCGGTGGAACTGCTGGTTGCGTTTTTCCGAATCCCAGAGAAAAGGAAGATGACCAAATTCGAGTTCTAGTGAAGAGGGTTTTGAGAGAACTGAGTAATACTCCGGTGGGTGTCGCTGAATTTACCGTTGGACTCGATGCTCGTATTGAGAAATTGTCGGAATTGTTGGACTTGAGATCCAACGGCATAAGAGTGTTGGGATTGTATGGGATGGGTGGGGTTGGTAAGACAACCCTTGCGAAGGCCCTTTTTAACAGGCTCGTTGTGCATTTTGAGCATCGCAGCTTCATTTCAAGTGTTAGAGAAGCTTCATCGAAAGACGGAGGTTTAATTGCTTTAAGAAACAACATTAGCAGAGATATTTCCTCTGAAGTAGTTGTTGGTTATGATATTCGTGCTTTCAAAAGAATAGTTGATCAATATCGAGTTCTGATATTCCTGGATGATGTGGATGATGTGAAGCAACTCGATACTCTAATAGGAAAAAGAGAATGGTTCCATGAGGGAAGCCGTATGGTAATCACCTCAAGGGATGCACGTGCTTTGCCTGAGACTCATGTTAATGTCCTCTATGAGGTTAAGGTATTGGATGACTCTTATTCATTTGAACTATTCTGTTACCATGCAATGAGAAGAAATGAACCTGCAGACAAAACTCTTTTGAAGTTGTCGAAGGAAATAGTGTCTCTGACGGGAGGGTTGCCTTTGGCTCTGGAAGTGTTTGGTTCAATGTTGTTTGGGAAGAGAAAGGAAGGGGAATGGGTTGATGTTGTGAAGAAGCTGAAGCTGACTCAACCTGGGAACGTACATAATGTGTTGAGGATCAGTTATGAGGGGTTAAATGAACAAGAGAAATGCATCTTCCTTGACATTGCTTGTCTGTTCGTTCAGATGAGGATGAAGCGAGAAGATGTGATTGATGTACTGAGAGGTTGTAGATTTAATGGAGAGGAAGCAATCAAAGTTCTTTCAAAAAAATGTCTGATCAAAATCAGAGAGAACGAAACAATTTGGATGCATGATCAAATTAGAGACATGGGAAGGCAAATTGTTGAACGGGAAAACCGTGTTGATCCTGGAATGCGTAGTAGATTGTGGGATCGATCTGAAATTCTAAATGTCTTGAGGAATTTGAAAGGAACAATCAGTATTCATGGGATGGTTCTAGACTTCGAGAAAGGAGCTGCTAAATATAATAAAGGTGATGAAGCAAGTGTTGGGGAAAACCTTCGATGTGGTTCCAGTTTTGCAAATGCCGTGAGATTCCTTAAACAGATGCAATATTTTCAACGGGTCGAGAGAGACATGGAGGCTGGAGTGCTTCACACGAAGGCCTTTAAATCAATGGCGAAGTTGATGCTGCTTCAGATCAATAATTTGAGACTGGAAGGGAAGTTTAAATCTTTCCCTGCAGAATTGAGGTGGCTACAATGGCAAGGATGTCCTTTAAAATGCTTGCCTTCTGATTTTTGGCCCCGAGAATTGGCTGTCCTTGATCTCAGACACAGCTATATTGAAAATTTGTGGGATCGGAAAGGCTCCAAGGCACCAGAGAATATAATGGTCATGAACCTTTCCGACTGCTACCACCTGGAGGCTCTCCCTGATCTTTCTGGCTGCCGAGGTTTAGAGAAGATTGTTCTAGTGAACTGTATTAAACTACGTAGGATTAACGAATCAATTGGCAATCTGATCACACTTCGTCATTTGAATCTGACACTTTGCAAAGAACTTACTAGGTTACCCGATGATATATCTGCGTTGGAAAATCTAGAGAGCCTCTGTCTCTCTGGCTGCTTGAAGTTGAAATCGTTACCAATAAACATGGCCAACTTGAAATCACTAAGAAAACTCCTTGCTGATGGCACGGGTATAGAGGAGCTCCCCCAAACTATTCTTCGTCTTGATAAACTTGAAATTTTTATCTTAAATGGTTGCCAAAACTTAAAAAGACTACCTGACAACATCGGACTTTTGTGTTCTCTGCAAGAATTGTCTCTCATCAAATCTGGATTAGAAGAACTACCCAATTCTGTCGGGCATTTGAAAAATCTTGAGAAGCTTGGTTTGATGCATTGCAAATCTCTCACTGAGATTCCTGATTCTATTGGAGATCTCGTGTCCCTTCCAAAGCTTCAGCTTTATGGTAGTGCTATTAAAGAGCTTCCTTCTTCGATTGGATCATTGTCTCATCTGAAAGAACTCTCAGTAGGAGATTGTAAGTATCTGAATAAATTGCCTGAGTCCATTAAGTCTCTGGTTTTGATTGTTGAGCTTCAGTTAGATGGGGCGCCGATCACAGATTTGCCAGATGAGATTGGAAATATGACATTGCTTAAAAAGCTTAAAATGAGGAATTCCCAGATGAGATATCTACCCAAATCGATTGGCAACCTCACAGCTCTTACAACCTGGGACCTCTTCAACGGCAACATTGTAGAACTGCCAGAGTCCGTTGGAAGGCTTGAGAACCTAGAGTATTTAAGGTTGGACCAATGCACAATGCTTAGAAATCTTCCGCATTCTATAGGACATTTGAAGTCCTTGTATGATCTTCGGATGCCGGAAACAGGTCTTACAGAATTACCTGAAAGTTTTGGTATGCTTACCAGCTTACAAACGTTGAAAATGGCCAATAAGTCTGAAAATAACTTGCTTCAAGATTCTTCTGTAATCTCATCTTTTTTCTGCAATATGATGTTCCTGAATTATCTGGACGCTCGTTGTTGGAGAATATCCGGAAAAATTCCTGATGATTTTGAGAACTTGTCATCTTTGGAGACCTTAAATCTAAGCCAAAACAAATTTCACAGCCTTCCTTCCAGTTTGGCAGGCCTTTCGATTCTCAAGAAGCTCTCTCTTCAAAACTGCATCGAGCTGGTTTCTCTCCCCGCTCTTCCCTCAAGCTTGATAGAGCTGAATGCTGCAAACTGTTGTACCTTACAAAGCATTCATGACCTTTCAAATTTAACAAATTTGCAGGATCTAAACTTCACCAATTGTGAAAAGTTGGTAGACATTCCTGGCCTTGAACGGTTAGGGTCTTTGAGGAAATTGTTCTTTGGTGGATGCGTTACATGCTCCTACACTATCCGCAAGAGACTTTCCAAGGTTGCGCTGAGGAATTTAAGGAACTTGAGCATGCCGGCTACAAGATTACCCCCGTGGTTTTCAGGACAAACTCTAAGCTTTTCGAAGCCCAAGAACCGTGAAATAACTGGTGTAATTATAGGTATCATTCTTTCAATCAATCATGATATACCTAGTGAACGACATCGTGTTCCTGGAGTAGTTGATATCAAAGCAAATATCCTCAAACGTGGAATGAATGTATATAGTTCAGTATTGGACTTGCGTGGATTGCCGAGAACAAATGAAGAACACATACACCTTTGCAGGTACCCTGATTATTCTCGACTCATGTCTATATTGCGACACGGTGACACAATTTGTGTGACACTGAGAGACCCACCTATGGATAAGGGGTTAGAGCTGAAAAAATGTGGGATTCATTTGATCTTTGAAGGGGATGATGACTATGGTGGAGATGAAGAATCTGTCGAGCGAAGTTTGCAATCTGTGTCAGAAAAATTGGCCAAATTTTTCAACACTCGCGAAGAAGATAGTTCCAAAGATGATGGAATTAAGAGTGAAGATGATGACAATGAGTGCCAAAATGAATTAGACACTCAAAGGGGAAGATAG 4149 0.4249 MSPGGDVSSSTPASFRRRWDVILSFRSSDNCGCFTEPLYNALQSSRVRVFLDDVGLDRGDQMAPSPQGAIDDSAASIIIVSPNYASSHWSLEKLAKICDCGRLILPVFFNVDPRDVRKQGGPFKDSFDDHKAKRAEEEVLRWREAMKKVGGTAGCVFPNPREKEDDQIRVLVKRVLRELSNTPVGVAEFTVGLDARIEKLSELLDLRSNGIRVLGLYGMGGVGKTTLAKALFNRLVVHFEHRSFISSVREASSKDGGLIALRNNISRDISSEVVVGYDIRAFKRIVDQYRVLIFLDDVDDVKQLDTLIGKREWFHEGSRMVITSRDARALPETHVNVLYEVKVLDDSYSFELFCYHAMRRNEPADKTLLKLSKEIVSLTGGLPLALEVFGSMLFGKRKEGEWVDVVKKLKLTQPGNVHNVLRISYEGLNEQEKCIFLDIACLFVQMRMKREDVIDVLRGCRFNGEEAIKVLSKKCLIKIRENETIWMHDQIRDMGRQIVERENRVDPGMRSRLWDRSEILNVLRNLKGTISIHGMVLDFEKGAAKYNKGDEASVGENLRCGSSFANAVRFLKQMQYFQRVERDMEAGVLHTKAFKSMAKLMLLQINNLRLEGKFKSFPAELRWLQWQGCPLKCLPSDFWPRELAVLDLRHSYIENLWDRKGSKAPENIMVMNLSDCYHLEALPDLSGCRGLEKIVLVNCIKLRRINESIGNLITLRHLNLTLCKELTRLPDDISALENLESLCLSGCLKLKSLPINMANLKSLRKLLADGTGIEELPQTILRLDKLEIFILNGCQNLKRLPDNIGLLCSLQELSLIKSGLEELPNSVGHLKNLEKLGLMHCKSLTEIPDSIGDLVSLPKLQLYGSAIKELPSSIGSLSHLKELSVGDCKYLNKLPESIKSLVLIVELQLDGAPITDLPDEIGNMTLLKKLKMRNSQMRYLPKSIGNLTALTTWDLFNGNIVELPESVGRLENLEYLRLDQCTMLRNLPHSIGHLKSLYDLRMPETGLTELPESFGMLTSLQTLKMANKSENNLLQDSSVISSFFCNMMFLNYLDARCWRISGKIPDDFENLSSLETLNLSQNKFHSLPSSLAGLSILKKLSLQNCIELVSLPALPSSLIELNAANCCTLQSIHDLSNLTNLQDLNFTNCEKLVDIPGLERLGSLRKLFFGGCVTCSYTIRKRLSKVALRNLRNLSMPATRLPPWFSGQTLSFSKPKNREITGVIIGIILSINHDIPSERHRVPGVVDIKANILKRGMNVYSSVLDLRGLPRTNEEHIHLCRYPDYSRLMSILRHGDTICVTLRDPPMDKGLELKKCGIHLIFEGDDDYGGDEESVERSLQSVSEKLAKFFNTREEDSSKDDGIKSEDDDNECQNELDTQRGR 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3533g00052 1382 Gene3D - 343 429 IPR042197 -
Pral3533g00052 1382 MobiDBLite consensus disorder prediction 1350 1382 - -
Pral3533g00052 1382 SUPERFAMILY L domain-like 487 910 - -
Pral3533g00052 1382 Gene3D Ribonuclease Inhibitor 570 793 IPR032675 -
Pral3533g00052 1382 Pfam NB-ARC domain 196 419 IPR002182 GO:0043531
Pral3533g00052 1382 Gene3D Ribonuclease Inhibitor 794 890 IPR032675 -
Pral3533g00052 1382 PRINTS Disease resistance protein signature 828 844 - -
Pral3533g00052 1382 PRINTS Disease resistance protein signature 285 299 - -
Pral3533g00052 1382 PRINTS Disease resistance protein signature 379 393 - -
Pral3533g00052 1382 PRINTS Disease resistance protein signature 213 228 - -
Pral3533g00052 1382 SMART LRR_typ_2 901 924 IPR003591 -
Pral3533g00052 1382 SMART LRR_typ_2 970 994 IPR003591 -
Pral3533g00052 1382 SMART LRR_typ_2 807 830 IPR003591 -
Pral3533g00052 1382 SMART LRR_typ_2 760 783 IPR003591 -
Pral3533g00052 1382 SMART LRR_typ_2 854 877 IPR003591 -
Pral3533g00052 1382 SMART LRR_typ_2 1071 1094 IPR003591 -
Pral3533g00052 1382 Pfam TIR domain 20 163 IPR000157 GO:0007165
Pral3533g00052 1382 Gene3D Ribonuclease Inhibitor 891 1222 IPR032675 -
Pral3533g00052 1382 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 804 IPR044974 GO:0006952
Pral3533g00052 1382 MobiDBLite consensus disorder prediction 1350 1366 - -
Pral3533g00052 1382 ProSiteProfiles Leucine-rich repeat profile. 1073 1095 IPR001611 GO:0005515
Pral3533g00052 1382 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 150 IPR035897 -
Pral3533g00052 1382 SMART till_3 18 152 IPR000157 GO:0007165
Pral3533g00052 1382 ProSiteProfiles TIR domain profile. 17 179 IPR000157 GO:0007165
Pral3533g00052 1382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 439 IPR027417 -
Pral3533g00052 1382 SUPERFAMILY L domain-like 890 1196 - -
Pral3533g00052 1382 Gene3D - 178 337 IPR027417 -
Pral3533g00052 1382 Gene3D - 18 177 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3533g00052 Pral-Chr3533 734850 741196 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3533g00052 77 883 WRKY Transcription Factor Family AT4G12020 28.966 1.34e-72 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3533g00052 - - lang:109340539 1530.38