Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3533g00051 ATGTCACCGGAAGGCCACGTCATGTCGTCGACTCCGGGAGACTTCAGGCTCCGTTGGGACGTCTTCCTGAGCTTCAGAGGTGAGGATAGTCGTGATTGCCTCACAAAACCCCTCTACAATGCGCTCCAATCTCGCGGCGTTCGAGTTTTCCTGGACGATGTTGGGTTGGATCGCGGGGACCAGATAGCTCCGAGTCTGCTCGAAGCCATCGATGACTCGGCCGCTTCGATCATCATCATCTCTCCTGACTACGCCTCTTCTCATTGGTGTCTGGAGGAGCTTGCCAAGATTTGCGACTGCGGAAGACTGATTCTGCCGGTGTTCTACTACGTAGGCCCCACTGATGTCCTCGAACAAACAGGTCCATTTGAAGATTCTTTCAAAATTCATAAAGCCAAGAGGAGCGAAGATGAGGTAATCAGGTGGAGGAAAGCTATGAAGAAAGTAGGTGGACTTGCTGGTTGGGTTTTCCAGAATCCCAGCCAAGAAGACCATCTAATTGGACTTTTAGTACAAAGGATTCTGAAAGAACTAATTAATACTCCGGTTGGTTTGACTGAATTTACTGTTGGACTCAATGCTCGTATTGAAGAACTATTGGCATCGTTGGGCATGAAATCCAATGGCGTAAGAGTATTGGGATTGTTCGGGATGGGTGGGGTTGGCAAGACAACCCTTGCAAAGGCTCTTTTTAACAGACTCGTTGGGCATTTTAAGCATCGCAGCTTCATCTCAAGTGTTAGAGAAGTTTCTTCCAAAGATGGAGGTTTAATTGCTTTAAGAAACAAAATTATCAGAGATATTTCCTCTGAAGTAGTTGTTGGTGACGATATTCCTGCTTTCAAAAGAACAGTTGATCGATATCGAGTTCTGATATTCCTGGATGATGTGGATGATGTGAAGCAACTCGATACTCTAATAGGAAAAAGAGAATGGTTCCATGAGGGAAGCCGTATAATAATCACCTCAAGGGATGCACGTGCTTTGCCTGAGACTCATGTTAATGTCTTCTACGAGGTTAAGGTATTGGATGACTCTTATTCATTTGAACTATTCTGTTACCATGCGATGAGAAGAAATGAACCTGCAGACAAAACTCTTTTGAAGCTGTCGAAGGAAATAGTGTCTCTGACGGGAGGGTTGCCCTTGGCTCTGGAAGTGCTTGGTTCAATGTTGTTTGGTAAGAGAAAGGAAGAGGAATGGATTGATGCTGTGGAGAAACTGAAGATAATTCGATCTGGGAATCTTCGGGAAGTGCTGAAGATCAGTTATGAGGGGTTAGATGAGCAAGAGAAATGCATCTTCCTTGACATTGCTTGTCTGTTCGTTCCGATGAGGATGAAGCGAGAAGATGTTATTGATGTACTAAGAGGCTGTAGATATGGGGGAGAGATAGCAATCACAGTTCTCACAGAAAAATGCTTGATCAAAATCAGAGAGGACGAAACCATTTGGATGCATGATCAAATTAGAGATATGGGACGGCAAATTGATGTGGAAGAAAACCTCGTTGAGCCGGGTATGCCTGGTCGATTGTGGGATCGATCTGAAATTCTAGCTGTTTTGAGGAATATGAAGGGATCTCGTAGTATTCAAGGGATGGTGCTAGACTTCGAGGAAAGATCTACTAAAGACAACGAACAAGCAATTTCTTGTTGCAACCTTAAATCTGGTTCCAGTTTCGTGAATGCCCTGTCATTCCTTAAACAGATTCACGGGAAATATTTTCAACGAGTTGAGAGGGACAAAGAGGTCACAGTGCTTCGAACCAAGCCCTTTGAATCCATGGTGAACTTGGTGCTGCTTCAGATCAATAATTTGAGGTTGGAAGGGAAGTTTAAATCTTTCCCTGCAGAATTGAAGTGGCTACAATGGCAAGGATGCCCTTTAAAGTGCATGCCTTCTGATTTTTGGCCCCAAGAATTGGCTGTCCTTGATCTCGCACACAGCTATATTGAGAATTTGTGGAATCGGAAGGGATGCAAGGTGCCCAAGAACCTCATGGTCATGAACCTCTCCTATTGCTATCACCTGGAGGCTCTTCCTGATTTGTCTGGCTGTAGATGTTTAGAGAAGATTGTTCTAGTGAATTGCATTAAACTAAGAAGGATTCACGAATCAGTTGGCGATCTGACCACACTTCGTCATTTGAATATGACTCGTTGTACTGAACTTAGTGAGTTACCCAATGATTTATCTGGGCTGAAAAATCTTGAGAGCCTGTGTCTCTCCGATTGCTGCAAGTTAAAATCGTTACCAAGGAACATAGCCAACTGGAAATCTCTAAGAAAACTTCTTGCTAATGGCACGGCTTTAGCAGGGCTGCCTGAGACTTTTTTTCACCTTGAGAAACTTGAAATTCTTATTTTAGATGGTTGCCAAAACTTAAAAAGACTACCCGATAACATAGGACTTTTGTGCTCTCTACAAGAGCTGTCTCTCGACAAATCTGGGTTAGAAGAACTACCCAAAACTGTCGGGCATTTGAAAAAACTAGAGAAGCTTGGTTTGATGCATTGCTATTCTCTCACTAAGATTCCTGATTCTGTTGGAAACCTCGTTTCGCTTTCAGAACTTATGCTTTCTGGAAGTGCTATTAGAGAGCTTCCTTCTTCCATTGGATCATTGTGTTATCTAAACGAACTCTCTGTAGGATATTGTAAGTCTCTGAAAAAGTTGCCTGAGACTATTCAGCTTTTGGCTTCCGTTATTGAGCTTCAGCTAGATGGGACAGCGATCACCAATTTGCCAGATGAAATTGGCGATATGAAATTGCTAAGAAAGCTTGAAATGAGGAATTGCCAGATGAGATCTCTACCTGAATCGATTGGACGCCTCGCAGCTCTTACAACCTTGGACATTTCCAATGGAAACATCGAAGAATTGCCAGACTCCATCAAAGAGATGAAAAATCTTGTTCATTTGAGGTTGGACAAATGCATAATGCTCAGAAAGCTTCCTGAGTCTATAGGATCTTTGAAGTCCTTGCGTCATCTTGGGATGGTGGAAACAGGTCTGACAGAATTACCTGAAAGCTTTGGTATGCTTACCAGCTTACAAACATTGAAAATGGCCAATAAGTCTGAAAATAACTTGCTTCACGATTCTTCTGTAATCTCATCTTTTTTCTGCAATATGATATTTCTGAATGATCTGGACGCTCGTTGTTGGAGAATATCTGGAAAAATTCCTGATGATTTTGAGAAGTTGAAGTCTTTGGAGACTTTGAATCTAAGCCAAAACAAATTTCACAGCCTTCCTTCCAGTTTGGCCGGCCTTTCGATTCTGAAAAAGCTCCATCTTCAAAACTGCATCGAGCTGGTTTCTCTCCCTGCTCTTCCCTCAAGCTTGATAGAGCTGAATGCTGCAAACTGCTGTACCTTACAAAGCATTCCCGACCTTTCAAATTTAACAAGTCTTAAGGATCTAAACCTCACGAATTGTGTAAAAGTGGTGGATATTCCAGGTCTTGAACGGTTGGTGTCTTTGAGGAGTTTGTACTTGGGTGGGTGCATTGCATGCTCCTTCCCAATCCGCAAGAGATTTTCTAAGGTTACAATGAGGAATTTAAGGAACTTGAGCATGCCAGGAACCAGATTACCCAAATGGTTTTCAGGACAAGCTGTAAGCTTTTCGAAGCCCAAGAACCGTGAACTAACAGGTGCAATTATGGGTATCATTCTTTCTATCAACCATGAAACACCGAGTGAACTGCCAGTTGAACTTCCCGGAGTAGTTGATATCAAAGCAAATGTCCTCAGACTGGGCAAAAACATATATAGTTCAGTGTTAGACTTGCATGGGTTGCCAAGAACGAATGATGAACACTTGTACCTTTGTAGATTCCCAGACTACCATCCACTCATCTGTCGCTTGCGAGATGGGGACACATTTTGTGTGACGAAGAAAAACCCACCTATGGATGAGAGATTGGAGTTGAAAAAATGGGCGGTTCATCTGATGTTTGAAGGGGATGACGATTATGATGGAGATGAAGAATCTGCGGATAGAAGCCTACAATCTGTGTCAGAAAAGCTGGCCAAGTTTTTCAACACTTACGAAGAAGATGGCCCCATGGATGATGATATTGGAGTGGAGATGAAGAGTGCCTGA 4113 0.4301 MSPEGHVMSSTPGDFRLRWDVFLSFRGEDSRDCLTKPLYNALQSRGVRVFLDDVGLDRGDQIAPSLLEAIDDSAASIIIISPDYASSHWCLEELAKICDCGRLILPVFYYVGPTDVLEQTGPFEDSFKIHKAKRSEDEVIRWRKAMKKVGGLAGWVFQNPSQEDHLIGLLVQRILKELINTPVGLTEFTVGLNARIEELLASLGMKSNGVRVLGLFGMGGVGKTTLAKALFNRLVGHFKHRSFISSVREVSSKDGGLIALRNKIIRDISSEVVVGDDIPAFKRTVDRYRVLIFLDDVDDVKQLDTLIGKREWFHEGSRIIITSRDARALPETHVNVFYEVKVLDDSYSFELFCYHAMRRNEPADKTLLKLSKEIVSLTGGLPLALEVLGSMLFGKRKEEEWIDAVEKLKIIRSGNLREVLKISYEGLDEQEKCIFLDIACLFVPMRMKREDVIDVLRGCRYGGEIAITVLTEKCLIKIREDETIWMHDQIRDMGRQIDVEENLVEPGMPGRLWDRSEILAVLRNMKGSRSIQGMVLDFEERSTKDNEQAISCCNLKSGSSFVNALSFLKQIHGKYFQRVERDKEVTVLRTKPFESMVNLVLLQINNLRLEGKFKSFPAELKWLQWQGCPLKCMPSDFWPQELAVLDLAHSYIENLWNRKGCKVPKNLMVMNLSYCYHLEALPDLSGCRCLEKIVLVNCIKLRRIHESVGDLTTLRHLNMTRCTELSELPNDLSGLKNLESLCLSDCCKLKSLPRNIANWKSLRKLLANGTALAGLPETFFHLEKLEILILDGCQNLKRLPDNIGLLCSLQELSLDKSGLEELPKTVGHLKKLEKLGLMHCYSLTKIPDSVGNLVSLSELMLSGSAIRELPSSIGSLCYLNELSVGYCKSLKKLPETIQLLASVIELQLDGTAITNLPDEIGDMKLLRKLEMRNCQMRSLPESIGRLAALTTLDISNGNIEELPDSIKEMKNLVHLRLDKCIMLRKLPESIGSLKSLRHLGMVETGLTELPESFGMLTSLQTLKMANKSENNLLHDSSVISSFFCNMIFLNDLDARCWRISGKIPDDFEKLKSLETLNLSQNKFHSLPSSLAGLSILKKLHLQNCIELVSLPALPSSLIELNAANCCTLQSIPDLSNLTSLKDLNLTNCVKVVDIPGLERLVSLRSLYLGGCIACSFPIRKRFSKVTMRNLRNLSMPGTRLPKWFSGQAVSFSKPKNRELTGAIMGIILSINHETPSELPVELPGVVDIKANVLRLGKNIYSSVLDLHGLPRTNDEHLYLCRFPDYHPLICRLRDGDTFCVTKKNPPMDERLELKKWAVHLMFEGDDDYDGDEESADRSLQSVSEKLAKFFNTYEEDGPMDDDIGVEMKSA 1370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3533g00051 1370 Gene3D - 17 180 IPR035897 -
Pral3533g00051 1370 Pfam TIR domain 19 178 IPR000157 GO:0007165
Pral3533g00051 1370 SUPERFAMILY L domain-like 890 1200 - -
Pral3533g00051 1370 SUPERFAMILY L domain-like 485 917 - -
Pral3533g00051 1370 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 801 IPR044974 GO:0006952
Pral3533g00051 1370 SMART till_3 18 152 IPR000157 GO:0007165
Pral3533g00051 1370 Gene3D - 342 428 IPR042197 -
Pral3533g00051 1370 SMART LRR_typ_2 900 923 IPR003591 -
Pral3533g00051 1370 SMART LRR_typ_2 735 759 IPR003591 -
Pral3533g00051 1370 SMART LRR_typ_2 853 876 IPR003591 -
Pral3533g00051 1370 SMART LRR_typ_2 806 829 IPR003591 -
Pral3533g00051 1370 SMART LRR_typ_2 1070 1093 IPR003591 -
Pral3533g00051 1370 SMART LRR_typ_2 993 1015 IPR003591 -
Pral3533g00051 1370 SMART LRR_typ_2 946 969 IPR003591 -
Pral3533g00051 1370 ProSiteProfiles Leucine-rich repeat profile. 1072 1094 IPR001611 GO:0005515
Pral3533g00051 1370 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 155 IPR035897 -
Pral3533g00051 1370 Pfam NB-ARC domain 195 424 IPR002182 GO:0043531
Pral3533g00051 1370 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 438 IPR027417 -
Pral3533g00051 1370 Gene3D Ribonuclease Inhibitor 889 1220 IPR032675 -
Pral3533g00051 1370 Gene3D - 181 336 IPR027417 -
Pral3533g00051 1370 Gene3D Ribonuclease Inhibitor 797 888 IPR032675 -
Pral3533g00051 1370 Gene3D Ribonuclease Inhibitor 570 796 IPR032675 -
Pral3533g00051 1370 ProSiteProfiles TIR domain profile. 17 178 IPR000157 GO:0007165
Pral3533g00051 1370 SMART LRR_bac_2 782 802 - -
Pral3533g00051 1370 SMART LRR_bac_2 664 684 - -
Pral3533g00051 1370 SMART LRR_bac_2 946 965 - -
Pral3533g00051 1370 SMART LRR_bac_2 1114 1134 - -
Pral3533g00051 1370 SMART LRR_bac_2 1070 1089 - -
Pral3533g00051 1370 PRINTS Disease resistance protein signature 212 227 - -
Pral3533g00051 1370 PRINTS Disease resistance protein signature 780 796 - -
Pral3533g00051 1370 PRINTS Disease resistance protein signature 284 298 - -
Pral3533g00051 1370 PRINTS Disease resistance protein signature 378 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3533g00051 Pral-Chr3533 719964 726594 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3533g00051 19 835 WRKY Transcription Factor Family AT4G12020 27.778 5.70e-70 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3533g00051 - - lang:109340539 1617.05